Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D22
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   152   7e-39
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.2  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           22   9.8  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   9.8  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  152 bits (368), Expect = 7e-39
 Identities = 72/113 (63%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
 Frame = +2

Query: 11  MADQTE-KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 187
           MADQ   +AFQKQ  + LNRK   ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG+
Sbjct: 1   MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60

Query: 188 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
           +SIRGRILTGVV+K  +   + IRRDYL ++ KY+ FEKR+RNM +HLSPCFR
Sbjct: 61  ISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFR 111



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +3

Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLK 425
           DVE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 112 DVEAGDIVTLGECRPLSKTVRFNVLK 137


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 214  GEDAAADRNVASEGTLLVNVGT 149
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 91  HASP*ECWFRLQNSQRGD*GYLH 159
           H  P EC   + +S     GYLH
Sbjct: 82  HYEPMECHSAVNSSSNSSTGYLH 104


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 86  SSSCHLSCSGKRWPVS 39
           +SSC L  +G RW VS
Sbjct: 447 ASSCFLPEAGARWDVS 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,850
Number of Sequences: 2352
Number of extensions: 9165
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)