Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_D22
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 156 7e-39
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 3.2
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 28 4.2
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 28 4.2
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 28 4.2
Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 27 5.5
U55370-6|AAA97997.1| 150|Caenorhabditis elegans Hypothetical pr... 27 7.3
>Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical
protein F40F11.1 protein.
Length = 155
Score = 156 bits (379), Expect = 7e-39
Identities = 73/115 (63%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Frame = +2
Query: 11 MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 181
M++QTE+AF KQ TV LN K + +K R+ + VGLGFK PR+A+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60
Query: 182 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
GNV IRG ILTGVV K KM RTIV+RRDYLHY+ KY R+EKRH+N+ H SP FR
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFR 115
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 321 PYICRLASGDVEIGDIVTIGECRPLSKTVRFNVLKV 428
P C A D+ GD+VTIGECRPLSKTVRFNVLKV
Sbjct: 107 PAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV 142
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 83 SSCHLSCSGKRWPVSETLSLSD 18
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 83 SSCHLSCSGKRWPVSETLSLSD 18
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 221 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRG 349
V+ + ++ I +RR Y +++F +R+ +S PCF+G
Sbjct: 605 VEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQG 647
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 221 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRG 349
V+ + ++ I +RR Y +++F +R+ +S PCF+G
Sbjct: 542 VEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQG 584
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 363 HQSPRPLKQGDKCTDMFLCRFSN 295
H++P PL G++CTD F C N
Sbjct: 670 HEAPNPLAPGNRCTD-FPCNDRN 691
>Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical
protein R06B9.1 protein.
Length = 423
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 95 ACPSSSCHLSCSGKRWPVSETLSLSDPP 12
AC S LS WP S TL L+ PP
Sbjct: 92 ACKDGSNELSAGDYVWPFSYTLPLNVPP 119
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 223 SEDEDAENYRDPPRLPSLPTQIQ*VRETAQEHVRTFVALL 342
S++ED E+ DP LP + + E +R+ +ALL
Sbjct: 199 SQNEDIESSEDPLILPETENDVTLPASSVSEQLRSTIALL 238
>U55370-6|AAA97997.1| 150|Caenorhabditis elegans Hypothetical
protein K03B4.2 protein.
Length = 150
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 273 TTYPN-TIGSRNGTGTCPYICRLASGDVEIGDIVTIGECRPLSK 401
TT PN IGS G GT + R S D + T G+ + L K
Sbjct: 55 TTPPNLVIGSNGGAGTIATVPRSKSQDEIVKKQKTAGQSKALKK 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,883,777
Number of Sequences: 27780
Number of extensions: 216801
Number of successful extensions: 562
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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