Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D20
         (371 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...   105   1e-23
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...   105   1e-23
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...    89   1e-18
02_02_0196 + 7685933-7685961,7686086-7686284                           88   2e-18
01_06_0957 - 33352904-33353212,33353316-33353465,33353544-333536...    27   6.2  

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score =  105 bits (251), Expect = 1e-23
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +1

Query: 40  EHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 219
           EHIDLGIKYDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY
Sbjct: 110 EHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKY 169

Query: 220 DG 225
           +G
Sbjct: 170 EG 171


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score =  105 bits (251), Expect = 1e-23
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +1

Query: 40  EHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 219
           EHIDLGIKYDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY
Sbjct: 110 EHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKY 169

Query: 220 DG 225
           +G
Sbjct: 170 EG 171


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score = 89.0 bits (211), Expect = 1e-18
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = +1

Query: 61  KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 225
           +YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 116 RYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 170


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 88.2 bits (209), Expect = 2e-18
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +1

Query: 64  YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 225
           YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 11  YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 64


>01_06_0957 -
           33352904-33353212,33353316-33353465,33353544-33353684,
           33354116-33354709
          Length = 397

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 83  FMDWTFTSYLAGQVS--T*HTEGVRQEKWDFPTASQRKML*SGSN 211
           F +W  T+  A  ++  T  T G   ++W   TA+ R+ML  GS+
Sbjct: 106 FPEWLITALFAVFLASATFKTYGTGMKRWRAETAAARRMLEGGSS 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,867,141
Number of Sequences: 37544
Number of extensions: 126718
Number of successful extensions: 310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)