Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D20
         (371 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   0.66 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   8.2  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    20   8.2  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +1

Query: 46   IDLGIKYDP-SIGIYGL--DFYVVLGRPGFNVAHRRRKTGKVG 165
            + +GI + P + G+ G     Y + G    NVA R   TGKVG
Sbjct: 894  LKMGINHGPVTAGVIGARKPHYDIWGNT-VNVASRMESTGKVG 935


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 176 RWGNPTFPVLRLLCATLKPGR 114
           RW  PT P   LL A    GR
Sbjct: 443 RWTTPTTPHSPLLVAPFGAGR 463


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 153 RKSGISPPPHKGRCYEVV 206
           R + +SPPP K R  +VV
Sbjct: 898 RGTVVSPPPTKRRTMKVV 915


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 153 RKSGISPPPHKGRCYEVV 206
           R + +SPPP K R  +VV
Sbjct: 936 RGTVVSPPPTKRRTMKVV 953


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -1

Query: 176 RWGNPTFPVLR 144
           +WGNP  P+++
Sbjct: 841 KWGNPNRPIVQ 851


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 209 WNHFIASSFVRRWGNPTFPVLRLLCATL 126
           WN    +  +  W +P  P+LR    TL
Sbjct: 530 WNPLTDTVPIHTWIHPWLPLLRNRLDTL 557


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 186 LCEAVGKSHFSCLTPSVCYVETWPAKYDVK 97
           +CE V  S  S +T    Y ++ P   D+K
Sbjct: 40  ICERVYCSRNSLMTHIYTYHKSRPGDIDIK 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,479
Number of Sequences: 438
Number of extensions: 1299
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)