Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D18
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126139-1|AAI26140.1|  215|Homo sapiens lens intrinsic membrane...    38   0.032
BC074917-1|AAH74917.1|  215|Homo sapiens lens intrinsic membrane...    38   0.032
BC074916-1|AAH74916.1|  215|Homo sapiens lens intrinsic membrane...    38   0.032
BC069430-1|AAH69430.1|  215|Homo sapiens lens intrinsic membrane...    38   0.032
AF340020-1|AAK26328.1|  173|Homo sapiens MP19 protein.                 38   0.032
AF340019-1|AAK26327.1|  215|Homo sapiens MP19ins protein.              38   0.032
AF305941-1|AAG32328.1|  173|Homo sapiens LIM2 protein.                 38   0.032
AK097965-1|BAC05206.1|  152|Homo sapiens protein ( Homo sapiens ...    29   8.5  

>BC126139-1|AAI26140.1|  215|Homo sapiens lens intrinsic membrane
           protein 2, 19kDa protein.
          Length = 215

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>BC074917-1|AAH74917.1|  215|Homo sapiens lens intrinsic membrane
           protein 2, 19kDa protein.
          Length = 215

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>BC074916-1|AAH74916.1|  215|Homo sapiens lens intrinsic membrane
           protein 2, 19kDa protein.
          Length = 215

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>BC069430-1|AAH69430.1|  215|Homo sapiens lens intrinsic membrane
           protein 2, 19kDa protein.
          Length = 215

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>AF340020-1|AAK26328.1|  173|Homo sapiens MP19 protein.
          Length = 173

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>AF340019-1|AAK26327.1|  215|Homo sapiens MP19ins protein.
          Length = 215

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>AF305941-1|AAG32328.1|  173|Homo sapiens LIM2 protein.
          Length = 173

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 379
           G    +VG + L+++ A  +WM+    +   F H GLW YC  N
Sbjct: 8   GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49


>AK097965-1|BAC05206.1|  152|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40646 fis, clone THYMU2017398. ).
          Length = 152

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 237 LRSLEPVSPMWGL--YFSSFHLLVLTGWNHIQKCSLHSNIWDCGSIALIISGSLVTGLT 407
           +R L P+SP++ L  +F S  L +L G       S HSN+   GS     S S V G+T
Sbjct: 48  IRLLVPLSPLFPLVLFFLSQSLALLPGLECSGTISAHSNLRLPGSSDSPASASRVAGIT 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,544,792
Number of Sequences: 237096
Number of extensions: 1708166
Number of successful extensions: 6319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6312
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)