Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D18
         (561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   2.1  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   3.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   8.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.5  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 244 HWSQYHLCGGFISPPFICWSLLDGIISRNVLS 339
           H  +YHL   F S PF C       +++++L+
Sbjct: 2   HHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLN 33


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 244 HWSQYHLC 267
           +WS YHLC
Sbjct: 39  YWSMYHLC 46


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = +3

Query: 264 MWGLYFSSFHLLVLTGWNHIQKCSLHSNIWDC---GSIALIIS--GSLVTGLTKNLM 419
           M+GLY SSF +LV    +          +WD    G I L  +  GS+V  L + ++
Sbjct: 119 MFGLYLSSF-VLVCISMDRYYAVIKPLQLWDVDKRGKIMLSFAWIGSVVCSLPQTIV 174


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 364 LPQSHMFEWREHFWI*FHPVRT 299
           LP    F+W++ F+  ++P  T
Sbjct: 279 LPHLEEFDWQKPFYPGYYPTMT 300


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -3

Query: 418 IKFFVKPVTREPEIIKAILPQSHMF 344
           + +F++P+     ++ ++L  SHM+
Sbjct: 452 LSYFIEPIYFHSIVLGSLLNPSHMY 476


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 364 LPQSHMFEWREHFWI*FHPVRT 299
           LP    F+W++ F+  ++P  T
Sbjct: 279 LPYLEEFDWQKPFYPGYYPTMT 300


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 314 ESYPEMFSPFKHMGLWEYCFDNFRFPGYR 400
           ++ P+    F+  GL     DN +  GY+
Sbjct: 189 DNVPQPIESFEAAGLRNIVLDNIKKSGYK 217


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 255 VSPMWGLYFSSFHLLVLTGWNHIQKCSLHSNIW 353
           + P   L FSS  +  +    H+ KC+   + W
Sbjct: 144 IPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSW 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,852
Number of Sequences: 438
Number of extensions: 3075
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)