Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_D14
(651 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 32 0.018
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 30 0.055
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 27 0.51
DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein. 27 0.68
Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein... 26 1.2
AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative apyrase/n... 25 1.6
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 4.8
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 6.3
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.018
Identities = 19/80 (23%), Positives = 44/80 (55%)
Frame = +1
Query: 379 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENA 558
+E Q+NL++ +L + A + ++ ++ QLA D DE +KLR +IEE +
Sbjct: 293 EEKQSNLESAGRMGELLSELQAKLAWRNVIDQEEQLAAVD--DELKKLRTSIEEQEHRIR 350
Query: 559 SLKQMLEEANSFVEIIKEEL 618
+ + ++ + +S ++ + ++
Sbjct: 351 NREALVAKTDSTIDTYRADI 370
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 30.3 bits (65), Expect = 0.055
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 244 SLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKETQANLDTKISEDD 423
S +L+ + N ENL+ K +L Q SVE +++ L + + K +
Sbjct: 817 SRMSLEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKV 876
Query: 424 LTNPKGASEKYWQILAEKRQLALQDALDE-NEKLRKTIEELKEENASLKQMLEEANSFVE 600
LT+ + K + L K+Q LQ L+ +K ++ E+L+E+ +++ + N +
Sbjct: 877 LTDTEEVDRKLSEAL--KQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKWATKENMLRQ 934
Query: 601 IIKE 612
I E
Sbjct: 935 KIDE 938
Score = 28.3 bits (60), Expect = 0.22
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 319 QLSQESPGESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEK--YWQILAEKRQLAL 492
QL QE E + + + K+T+AN+++ +SE T K K + +I A+ R +
Sbjct: 688 QLIQEHEKELADFRAE---LKQTEANINSIVSEMQKTETKQGKSKDAFEKIQADIR--LM 742
Query: 493 QDALDENEKLRKTIE-ELKEENASLKQMLEEANSFVEIIKEEL 618
+D L E+ R E L + A+L+ M + +EL
Sbjct: 743 KDELSRIERFRSPKERSLAQCKANLEAMTSTKEGLENELHQEL 785
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.51
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 436 KGASEKYWQILAEKRQLALQDALDEN--EKLRKTIEELKEENASL 564
KG EK + L EKR+ L ++LD+N +K+ + E+LK N L
Sbjct: 37 KGEVEKQSKKL-EKRKETLGESLDKNHKKKIERDEEKLKNNNRDL 80
>DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein.
Length = 508
Score = 26.6 bits (56), Expect = 0.68
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 409 ISEDDLTNPKGASEKYWQILAEKRQLALQDALDE 510
+SE D +NP+ ASE EK + +Q+ +DE
Sbjct: 237 LSEMDFSNPRLASETINNWAREKTRQRIQEVVDE 270
>Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein
protein.
Length = 401
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 508 ENEKLRKTIEELKEENASLKQMLEEANSFV 597
E EKLR+T+E+ + +A L ++ + FV
Sbjct: 337 ETEKLRRTVEQTGKSSAELVRLKKLEEKFV 366
>AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 568
Score = 25.4 bits (53), Expect = 1.6
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 502 LDENEKLRKTIEELKEENASLKQMLEEANSFVE-IIKEELAD 624
LDE E+LR I LKEE +L ++ II EL D
Sbjct: 213 LDEVEQLRMEIGRLKEEGVQHIVVLSHCGLEIDRIIARELPD 254
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.8 bits (49), Expect = 4.8
Identities = 19/93 (20%), Positives = 40/93 (43%)
Frame = +1
Query: 343 ESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKL 522
E+ + + + KE + K D+L + K + E + +K + NE+
Sbjct: 341 ETYDALKAERVEKEKLVKEEIK-QYDELVSAKESKESTLKNSLDKFAKVQANMRATNERR 399
Query: 523 RKTIEELKEENASLKQMLEEANSFVEIIKEELA 621
+KT+E++ E L ++ + + I+E A
Sbjct: 400 KKTLEQIAAEEKRLLELQDVPKKNKKEIEESEA 432
Score = 23.0 bits (47), Expect = 8.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 502 LDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 615
L+E EKL+ + ELK K L A S ++I + +
Sbjct: 463 LEEKEKLQTELIELKRAVDESKSALSIAESELKICQHD 500
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 457 WQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELA 621
W+ + + +L+ + R+ IE+ KE+ +KQ + V+ ++EE+A
Sbjct: 848 WERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMA 902
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,380
Number of Sequences: 2352
Number of extensions: 11702
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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