Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_D13
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 253 7e-68
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 170 6e-43
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 117 6e-27
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 117 6e-27
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 117 6e-27
Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.18
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 0.94
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 0.94
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.2
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 1.6
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 28 6.6
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 253 bits (620), Expect = 7e-68
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +2
Query: 203 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 382
IINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+GKEL+IKI PNK E TLTI+
Sbjct: 21 IINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIM 80
Query: 383 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 562
DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYS++LVAD+V V S
Sbjct: 81 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTS 140
Query: 563 KHNDDEQYVWESSAGGSFTVRP 628
K+NDD+ Y WESSAGGSF VRP
Sbjct: 141 KNNDDDSYQWESSAGGSFVVRP 162
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 157 ETFAFQAEIAQLMSL 201
ETFAFQAEIAQLMSL
Sbjct: 6 ETFAFQAEIAQLMSL 20
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 170 bits (414), Expect = 6e-43
Identities = 86/148 (58%), Positives = 109/148 (73%), Gaps = 5/148 (3%)
Frame = +2
Query: 203 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 382
IIN+ Y NKEIFLRELISN+SDALDKIR SLTDP +L +E+ +KI ++ L I
Sbjct: 77 IINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETEEMSVKIKADRENRLLHIT 136
Query: 383 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS-----MIGQFGVGFYSSYLVADR 547
DTG+GMT+ DL+NNLGTIA+SGT F+ L A S +IGQFGVGFY+++LVADR
Sbjct: 137 DTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQDLIGQFGVGFYAAFLVADR 196
Query: 548 VTVHSKHNDDEQYVWESSAGGSFTVRPD 631
V V +K+NDD+QY+WES + SFT+ D
Sbjct: 197 VVVTTKNNDDDQYIWESDS-ASFTISKD 223
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 117 bits (282), Expect = 6e-27
Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Frame = +2
Query: 203 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 382
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 383 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 562
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 563 K---HNDDEQYVWESSAGGSFTVRPDSGEPLG 649
+ +D + W + S+ + SG G
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSGLQTG 205
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 117 bits (282), Expect = 6e-27
Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Frame = +2
Query: 203 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 382
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 383 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 562
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 563 K---HNDDEQYVWESSAGGSFTVRPDSGEPLG 649
+ +D + W + S+ + SG G
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSGLQTG 205
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 117 bits (282), Expect = 6e-27
Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Frame = +2
Query: 203 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 382
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 383 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 562
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 563 K---HNDDEQYVWESSAGGSFTVRPDSGEPLG 649
+ +D + W + S+ + SG G
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSGLQTG 205
>Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical
protein F49C12.4 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 206 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 385
+N + N ++F ++ +S+ + YESLT + + +I I+PNK E +T++
Sbjct: 75 LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132
Query: 386 TGIG 397
GIG
Sbjct: 133 LGIG 136
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 337 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 498
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 337 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 498
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.2
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 358 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 498
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.2
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 325 QRAVHQDHSQQERGHSYDH 381
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 352 QQERGHSYDHRYRYWYDQGRFGEQFGN 432
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = -2
Query: 282 ILSKASDELEISSRRKISLLE*KVLMIQGHKLSDLSLEREGFNLRWLCLHFFRHF 118
IL + +D + + S R + ++ + + + + +E N+ WL + +F+HF
Sbjct: 89 ILEEDADAIRVKSIRMAGFIAQCIIFLFVYTIVTMDVEIWKINMDWLKIQYFQHF 143
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 469 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 356
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 239 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 415
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 416 VNNLGTI 436
+ NL I
Sbjct: 194 ITNLALI 200
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 239 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 415
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 416 VNNLGTI 436
+ NL I
Sbjct: 194 ITNLALI 200
>Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical
protein W05H5.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +2
Query: 389 GIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKH 568
G+GM D+ ++ GT +G +A + M+G GF V S
Sbjct: 53 GVGMGANDIADSFGTSVGTGILTVTQAFILATVVEMMGSVASGFSGDGQQLQVVNTESYE 112
Query: 569 NDDEQYV 589
++ ++ V
Sbjct: 113 DNPDELV 119
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 343 DHSQQERGHSYDHRYRYWYDQGR-FGEQFGN 432
D SQQ+ ++Y + + YDQG +G +GN
Sbjct: 334 DQSQQQSDNNYGNANQDSYDQGNDYGNDYGN 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,399,002
Number of Sequences: 27780
Number of extensions: 329619
Number of successful extensions: 932
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -