Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C22
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0255 + 8357963-8358356,8358948-8359024,8359201-8359276,835...    31   0.60 
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713...    31   1.1  
08_01_0975 + 9819387-9821512,9821768-9821910,9822185-9822349,982...    30   1.8  
04_04_0359 + 24679907-24680146,24680511-24680939,24681111-246824...    28   5.6  
04_03_0031 + 9933279-9933282,9933288-9933728,9934029-9934657           28   5.6  
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903...    27   9.8  

>02_02_0255 +
           8357963-8358356,8358948-8359024,8359201-8359276,
           8359665-8359846,8360173-8360318,8360405-8360669,
           8360688-8361053,8361265-8361513
          Length = 584

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +2

Query: 176 PKWDLSMIVRKLATVIRGNFSALNFATSKEGRACYLKLSEILNPHTVVNRLNRATF 343
           P + +S IV  LAT      SA+ FA+ K+ R   L  SE+    T+ N L  A F
Sbjct: 463 PSFFISFIVMPLATNSSEAVSAIIFASRKKKRTLSLTFSEVYGGVTMNNTLCLAVF 518


>09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,
            7138413-7138538,7138650-7139619,7139641-7139737,
            7140026-7140113,7140336-7140396,7140425-7140447,
            7140663-7140776,7141193-7141306,7144731-7144825,
            7146506-7146824,7147166-7147309,7147463-7147564,
            7147868-7147971,7148121-7148247,7148804-7148845,
            7148939-7149091,7149326-7149426,7149807-7150227
          Length = 1139

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/90 (23%), Positives = 38/90 (42%)
 Frame = +2

Query: 374  EVVPQLKVSKKPRTIPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNHKFPGAFVMNKKL 553
            E + Q+K  K  + +   L  + +I   GS I VL+N +KE    Y    P + + +   
Sbjct: 820  EAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKE--DSYFAGLPISIIESWYQ 877

Query: 554  GKKLILGMRKIIAQRLERIMESDDETRGSC 643
                +  M  +I + L      ++   G+C
Sbjct: 878  RDGYVKSMADLIEKELSIFSNPEESVIGTC 907


>08_01_0975 +
           9819387-9821512,9821768-9821910,9822185-9822349,
           9822382-9822419
          Length = 823

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 416 IPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNHKFPGAFVMNKKLGKKLILGMRKIIAQ 595
           +PPK K+   + + G PIE + N+I E+   +N K+      N K   K I  +  +   
Sbjct: 582 VPPKSKYLAVLDLSGLPIEAISNSIGEL---FNLKYLCLNDTNLKSLPKTITRLHNLGTL 638

Query: 596 RLER 607
            LER
Sbjct: 639 SLER 642


>04_04_0359 +
           24679907-24680146,24680511-24680939,24681111-24682402,
           24682486-24682737,24682818-24682928,24683016-24683076,
           24683178-24683270,24683348-24683533
          Length = 887

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 368 IPEVVPQLKVSKKPRTIPPKLKHRLNIPIEGSPIEV 475
           +PEV+P++ + +K + I P  +  + IP+   P+E+
Sbjct: 424 VPEVLPEIALPEKAKEIAPP-EAAMEIPVPDVPMEI 458


>04_03_0031 + 9933279-9933282,9933288-9933728,9934029-9934657
          Length = 357

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 299 LNPHTVVNRLNRATFGCYRINARIPEVVPQLKVSKKPRTIPPKLKHRLNIPIEGSPIEVL 478
           L+  ++  R   +T  C  I  R    VP L+ S K  T P  +   + I +  SP E  
Sbjct: 129 LSSESIQIRCPASTITCL-IGGRTATSVPVLQ-STKSLTEPLPVPEPIEIVMVVSPFEAP 186

Query: 479 ENTIKEVISEYN 514
           E+  +E I E+N
Sbjct: 187 ESIFEESIKEFN 198


>02_04_0157 +
           20388761-20388763,20389807-20389935,20390206-20390349,
           20390690-20390835,20390915-20391071,20391312-20391370,
           20391466-20391664,20392232-20392381,20392471-20392607,
           20392717-20392863,20392975-20393076,20395655-20395712,
           20395816-20395917,20396236-20396273,20396409-20396535,
           20397092-20397259,20397356-20397487,20400222-20400331,
           20400400-20400460,20400929-20401106,20401194-20401399,
           20401552-20401671,20402523-20402621,20404177-20404386,
           20404704-20404843,20404945-20405053,20405351-20405431,
           20405523-20405693,20405825-20405974,20407029-20407202,
           20407453-20407479,20407688-20407758,20407843-20407942,
           20408305-20408361,20409457-20409513,20409656-20409736,
           20410336-20410421,20410535-20410649
          Length = 1466

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 589 NYLSHSQYKLFSKFLIHHKCSWK 521
           +YL+HSQY    K  I  +C+W+
Sbjct: 856 SYLAHSQYMGLKKAAITTQCAWR 878


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,785,735
Number of Sequences: 37544
Number of extensions: 298801
Number of successful extensions: 730
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)