Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C22
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as...    31   2.7  
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei...    31   2.7  
AF023457-1|AAB82797.1|  598|Homo sapiens protein phosphatase wit...    31   4.7  
AF023456-1|AAB82796.1|  753|Homo sapiens protein phosphatase wit...    31   4.7  

>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
            associated gene 1 protein.
          Length = 1844

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
 Frame = +2

Query: 242  LNFATSKEGRACYLKLSEILNPHTV----VNRLNRATFGCYRINARIPEVVPQLKVSKKP 409
            +N ++ + GR    +L E    H V    VN      F  Y I     ++    KV   P
Sbjct: 1156 VNASSQRSGRQILSQLKEATQSHQVDKQGVNSQKPCFFNSYYIGKSPKKISSPKKVVTSP 1215

Query: 410  RTIPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNHKFPGAFVMNKK 550
            R +PP    + + P    P + L N  K      N++  G  + N K
Sbjct: 1216 RKVPPP-SPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNK 1261


>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
            protein.
          Length = 1844

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
 Frame = +2

Query: 242  LNFATSKEGRACYLKLSEILNPHTV----VNRLNRATFGCYRINARIPEVVPQLKVSKKP 409
            +N ++ + GR    +L E    H V    VN      F  Y I     ++    KV   P
Sbjct: 1156 VNASSQRSGRQILSQLKEATQSHQVDKQGVNSQKPCFFNSYYIGKSPKKISSPKKVVTSP 1215

Query: 410  RTIPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNHKFPGAFVMNKK 550
            R +PP    + + P    P + L N  K      N++  G  + N K
Sbjct: 1216 RKVPPP-SPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNK 1261


>AF023457-1|AAB82797.1|  598|Homo sapiens protein phosphatase with
           EF-hands-2 short form protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 203 RKLATVIRGNFSALNFATSKEGRACYLKLSEILNPHTVVNRLNRAT 340
           RK+ T+    FSA N+      R  Y+KL   L PH V  + N+ T
Sbjct: 501 RKVLTI----FSASNYYEVGSNRGAYVKLGPALTPHIVQYQANKVT 542


>AF023456-1|AAB82796.1|  753|Homo sapiens protein phosphatase with
           EF-hands-2 long form protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 203 RKLATVIRGNFSALNFATSKEGRACYLKLSEILNPHTVVNRLNRAT 340
           RK+ T+    FSA N+      R  Y+KL   L PH V  + N+ T
Sbjct: 501 RKVLTI----FSASNYYEVGSNRGAYVKLGPALTPHIVQYQANKVT 542


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,883,257
Number of Sequences: 237096
Number of extensions: 1707811
Number of successful extensions: 2944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2944
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)