BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_C22
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-593|AAF45915.1| 788|Drosophila melanogaster CG6379-PA ... 31 1.4
AY071576-1|AAL49198.1| 788|Drosophila melanogaster RE63452p pro... 30 2.4
BT012492-1|AAS93763.1| 301|Drosophila melanogaster LD03460p pro... 29 5.5
BT003264-1|AAO25021.1| 334|Drosophila melanogaster LD22345p pro... 29 5.5
AY051619-1|AAK93043.1| 334|Drosophila melanogaster GH26634p pro... 29 5.5
AE014296-14|AAS64919.1| 334|Drosophila melanogaster CG6845-PB, ... 29 5.5
AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA, ... 29 5.5
>AE014298-593|AAF45915.1| 788|Drosophila melanogaster CG6379-PA
protein.
Length = 788
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 542 NKKLGKKLILGMRKI--IAQRLERIMESDDETRGSCFK 649
N +GKK I+G+RKI AQ LE E R C K
Sbjct: 437 NNAIGKKQIVGLRKIAAFAQNLELKETKQSEVRQECLK 474
>AY071576-1|AAL49198.1| 788|Drosophila melanogaster RE63452p
protein.
Length = 788
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 542 NKKLGKKLILGMRKI--IAQRLERIMESDDETRGSCFK 649
N +GKK I+G+RKI AQ LE E R C K
Sbjct: 437 NNAIGKKQIVGLRKIAAFAQNLELKETKRSEVRQECLK 474
>BT012492-1|AAS93763.1| 301|Drosophila melanogaster LD03460p
protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 385 WHNLRYACINSIASKCSSVQSVHYC 311
W N R++C+ + S CSS QS C
Sbjct: 198 WLNNRFSCLMCMCSCCSSCQSTERC 222
>BT003264-1|AAO25021.1| 334|Drosophila melanogaster LD22345p
protein.
Length = 334
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 385 WHNLRYACINSIASKCSSVQSVHYC 311
W N R++C+ + S CSS QS C
Sbjct: 231 WLNNRFSCLMCMCSCCSSCQSTERC 255
>AY051619-1|AAK93043.1| 334|Drosophila melanogaster GH26634p
protein.
Length = 334
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 385 WHNLRYACINSIASKCSSVQSVHYC 311
W N R++C+ + S CSS QS C
Sbjct: 231 WLNNRFSCLMCMCSCCSSCQSTERC 255
>AE014296-14|AAS64919.1| 334|Drosophila melanogaster CG6845-PB,
isoform B protein.
Length = 334
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 385 WHNLRYACINSIASKCSSVQSVHYC 311
W N R++C+ + S CSS QS C
Sbjct: 231 WLNNRFSCLMCMCSCCSSCQSTERC 255
>AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA,
isoform A protein.
Length = 480
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 385 WHNLRYACINSIASKCSSVQSVHYC 311
W N R++C+ + S CSS QS C
Sbjct: 377 WLNNRFSCLMCMCSCCSSCQSTERC 401
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,698,598
Number of Sequences: 53049
Number of extensions: 521531
Number of successful extensions: 1211
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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