Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C22
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical pr...    31   0.54 
AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin...    31   0.54 
Z70205-11|CAD44096.1|  409|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z68003-6|CAD44105.1|  409|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    28   5.0  
U64858-5|AAB18284.1|  409|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical
           protein R06A4.2 protein.
          Length = 837

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 15/77 (19%), Positives = 35/77 (45%)
 Frame = +2

Query: 338 TFGCYRINARIPEVVPQLKVSKKPRTIPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNH 517
           T G      ++PE +P+      P T+P   + +  +P++    +  E  +   +S+   
Sbjct: 128 TCGSVSRKEKVPETIPETLEETVPETVPEPERLQNRMPLDVEISDSFEKAMWNHVSQNAA 187

Query: 518 KFPGAFVMNKKLGKKLI 568
           +  G F+M ++   +L+
Sbjct: 188 RLTGKFLMTEQFWAELL 204


>AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin
           protein 6 protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 371 PEVV-PQLKVSKKPRTIPPKLKHRLNIPIEGSPIEVLENTIKEVISEYNHKFPGAFVMNK 547
           PEV+ P L V  + R + P LK RL+  I      +++    EV+SE+  +   +    K
Sbjct: 54  PEVLAPTLTVDMESRKVQPSLKARLSQSINPWKTSIIDQLRPEVVSEFRGRINFSVAFEK 113

Query: 548 K 550
           +
Sbjct: 114 E 114


>Z70205-11|CAD44096.1|  409|Caenorhabditis elegans Hypothetical
           protein E02H4.3b protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 260 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 403
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 57  KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 105


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 260 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 403
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 535 KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 583


>Z68003-6|CAD44105.1|  409|Caenorhabditis elegans Hypothetical
           protein E02H4.3b protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 260 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 403
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 57  KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 105


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 260 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 403
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 535 KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 583


>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
            homolog protein 1 protein.
          Length = 1722

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 254  TSKEGRACYLKLSEILNPHTVVNRLNRATFGCYRINARIPEVVPQLKV 397
            T  EGR C   ++E  NP+  +N     T G Y+   R   + P+  V
Sbjct: 1548 TGFEGRNCTTDINECANPNNCINGECTNTLGNYKCACRNGFIGPRCSV 1595


>U64858-5|AAB18284.1|  409|Caenorhabditis elegans Hypothetical
           protein C16D9.4 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 503 SEYNHKFPGAFVMNKKLGKKLIL 571
           +++  KFPG F+M K +  KLIL
Sbjct: 27  ADFECKFPGFFIMRKPMRDKLIL 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,119,269
Number of Sequences: 27780
Number of extensions: 286133
Number of successful extensions: 749
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)