Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_C15
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0204 + 23582239-23582338,23582866-23583213,23583357-235834... 33 0.26
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 32 0.35
02_05_0755 - 31519765-31519896,31520073-31520135,31520236-315203... 31 0.61
06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024,957... 31 1.1
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 30 1.9
09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470... 30 1.9
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 29 2.4
07_01_0080 + 587674-588510 29 3.2
01_07_0168 + 41621762-41621768,41621892-41622827,41622943-41623898 29 4.3
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 28 5.6
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 28 5.6
01_05_0302 + 20637139-20637291,20637390-20637476,20637609-206378... 28 5.6
03_02_0938 - 12563250-12563681,12564098-12564514,12565333-125654... 28 7.5
07_03_1211 - 24908295-24908534,24908928-24909005,24909542-249097... 27 9.9
>04_04_0204 +
23582239-23582338,23582866-23583213,23583357-23583472,
23583565-23584003,23584165-23584203,23584282-23584569,
23584667-23584806,23585080-23585563,23585828-23586090
Length = 738
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 220 YSGFLPDSSDYRYHFQVLGSSPNSQL 143
+SG PDSS++ Y F ++ SSP++ L
Sbjct: 63 FSGIFPDSSEFAYQFALIASSPDTIL 88
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 220 YSGFLPDSSDYRYHFQVLGSSPNSQL 143
+SG PDSSD+ Y F SSP++ L
Sbjct: 48 FSGLFPDSSDFAYGFVAAASSPDTAL 73
>02_05_0755 -
31519765-31519896,31520073-31520135,31520236-31520352,
31520553-31520642,31520897-31520984,31521462-31521531,
31521945-31522023,31523231-31523275,31523927-31524013,
31524101-31524184,31524304-31524483,31524562-31524702,
31524873-31524981,31525411-31525466,31525877-31525924,
31526021-31526159,31526710-31526817,31527138-31527164,
31527325-31527417,31527837-31527916,31528051-31528140,
31528286-31528376,31528503-31528591,31528756-31528794,
31530611-31530733
Length = 755
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 475 PRNEARKICQA----YEADLVAVNSPEEHGFIINNLMRLDPQKGSW 600
PR EA+++ Q YE LV N P++ GF+ L L +KG W
Sbjct: 706 PRKEAKEVVQECKEIYENSLVDGN-PQKSGFVFGKLKCLTARKGIW 750
>06_01_1145 -
9575173-9575553,9575712-9575858,9575971-9576024,
9576692-9576862,9577004-9577231,9577392-9577478,
9577600-9577761
Length = 409
Score = 30.7 bits (66), Expect = 1.1
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Frame = +1
Query: 208 GNQNNTQYRPGPQIPYGSFPVNNEYQQPPQSS--FYQDSLYNSDSYAENE--NDVENTAS 375
G+ Y G YG+ N +Q +S F L+ S +N+ N +E
Sbjct: 157 GHYYGVAYATGDANYYGTKVTINVWQPTIATSGDFSLSQLWISAGSYDNKDLNTIETGWQ 216
Query: 376 VYAGLDYEEKYRCPPNWLR--YKES-CYRFTKSPDRPRNEARKICQAYEADLVAVNSPEE 546
VY + ++K R W R Y E+ CY S N I + V++ +
Sbjct: 217 VYPAMYGDDKTRLFIYWTRDAYNETGCYNLACSGFIQTNPQFVI----GGSISPVSTYGD 272
Query: 547 HGFIINNLMRLDPQKGSWYIGAHQQSPGYW 636
+ + L+ DP G+W++ + GYW
Sbjct: 273 TQYEYDYLVWKDPAGGNWWLQVQGNNVGYW 302
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 166 QAPENGIYNQNYPEGNQNNTQYRPGP-QIPYGSFPVNNEY-QQPPQSSFYQDSLYNSDSY 339
QA NG Y+ + NQN+ QYR P Q S + + Q Y D+ +
Sbjct: 430 QAKANGNYDGYVRQSNQNHNQYRDMPDQAEVSSLDEMEGFAKDKSQMPSYDDNFFGEAEQ 489
Query: 340 AENENDVENTASVYAGLDYEEKYR 411
+E + A L+ E++ +
Sbjct: 490 SERTSSDREEKERQARLEQEQEMK 513
>09_02_0133 +
4707944-4708308,4708320-4708534,4708626-4708672,
4708997-4709393,4710042-4710608,4710708-4710838,
4711274-4711747
Length = 731
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 391 DYEEKYRCPPNWLRYKESCYRFTKSPDRPRNEAR 492
DY C PNW E+ YR + DRP AR
Sbjct: 260 DYFITMTCNPNWKEITENLYRSQQPQDRPDLVAR 293
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 256 GSFPVNNEYQQPPQSSFYQDSLYNSDSYAENENDVENTASVYAGLDYEEK 405
GS + +QPPQ+ Y+ + DS + EN V+ + DYE++
Sbjct: 392 GSHDTTSSQEQPPQTDMYRRTAVADDSGTQIENHVKFFNNQPLPHDYEDE 441
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 400 EKYRCPPNWLRYKESCYRFTKSPDRPRNEARKICQAYEADLVA 528
E++ PP+W +KE C+ P RN ++ + Y+A VA
Sbjct: 197 EQHHGPPDWYAFKELCHA-QFGPPIHRNALGELKRLYQASSVA 238
>01_07_0168 + 41621762-41621768,41621892-41622827,41622943-41623898
Length = 632
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 175 ENGI-YNQNYPEGNQNNTQYRPGPQIPYGSFPVNNEYQQPPQSSFYQDSLYNSD 333
EN + +NQ + +N T RPGP Y F + NE QQ + L+N D
Sbjct: 254 ENAMNHNQGVIDNVKNGTPKRPGPLETY-VFAMFNENQQTGDETRRHFGLFNPD 306
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 256 GSFPVNNEYQQPPQSSFYQDSLYNSDSYAENENDVENTASVYAGLDYEEK 405
GS + +QPPQ+ Y+ ++ DS EN V+ + DYE++
Sbjct: 431 GSHDTTSSQEQPPQTDMYRRTVVADDSGTLIENHVKFFNNQPLPHDYEDE 480
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 193 QNYPEGNQ---NNTQYRPGPQIPYGSF--PVNNEYQQPPQSSFYQDSL 321
Q+YPE + QY P PYG + P YQQPPQ YQ L
Sbjct: 405 QSYPEPPPPYYHGGQYPPYYP-PYGGYMPPPRMPYQQPPQYPAYQPML 451
>01_05_0302 +
20637139-20637291,20637390-20637476,20637609-20637836,
20638014-20638184,20638843-20638896,20639028-20639174,
20639326-20639706
Length = 406
Score = 28.3 bits (60), Expect = 5.6
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 8/152 (5%)
Frame = +1
Query: 205 EGNQNNTQYRPGPQIPYGSFPVNNEYQQPPQSSFYQDSL----YNSDSYAENE-NDVENT 369
+G+ Y G YG+ N +Q P ++F SL + SY + N +E
Sbjct: 153 DGHHYGVAYATGDSNYYGTKVTINVWQ-PTIATFGDFSLSQLWITAGSYENKDLNTIEAG 211
Query: 370 ASVYAGLDYEEKYRCPPNWLR--YKES-CYRFTKSPDRPRNEARKICQAYEADLVAVNSP 540
VY + ++K R W R Y + CY S N I + + ++
Sbjct: 212 WQVYPAMYGDDKTRLFIYWTRDAYNTTGCYNLACSGFIQTNPQFVIGGSLSPVSIYGSTQ 271
Query: 541 EEHGFIINNLMRLDPQKGSWYIGAHQQSPGYW 636
E+ +++ DP G+W++ GYW
Sbjct: 272 YEYDYLVWK----DPAGGNWWLQLQGNYVGYW 299
>03_02_0938 -
12563250-12563681,12564098-12564514,12565333-12565477,
12565574-12565722,12565836-12565948,12566423-12566458,
12566558-12566816
Length = 516
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 418 PNWLRYKESCYRFTKSPDRPRNEARKICQAYEAD 519
P W + E+ RFT PD E R + ++AD
Sbjct: 469 PPWKEWVENLDRFTSIPDPQLEEVRSAYRVWKAD 502
>07_03_1211 -
24908295-24908534,24908928-24909005,24909542-24909748,
24909849-24910038,24910195-24910532
Length = 350
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 219 ILVSFRIVLIIDTIFRCLGPHQTRNCEXQGT 127
+L RI+ DT+F +G H NC+ QG+
Sbjct: 202 VLYKCRILGTQDTLFDNIGRHYLYNCDIQGS 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,141,346
Number of Sequences: 37544
Number of extensions: 316565
Number of successful extensions: 985
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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