Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C13
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0150 - 2244757-2245303,2252925-2253277                           29   2.4  
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774...    29   3.2  
07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738...    28   7.4  

>09_01_0150 - 2244757-2245303,2252925-2253277
          Length = 299

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 234 LMFTIYKEFFVKFLFIALSIFRVYI*LIYICSFCHF 127
           L F + K+++V FL ++L +   +I L+Y    C F
Sbjct: 149 LAFLMVKKYYVPFLLLSLFVLVGFIFLVYFSVLCSF 184


>04_04_1098 +
           30876785-30876835,30876846-30877171,30877396-30877418,
           30877687-30879392
          Length = 701

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 25/128 (19%), Positives = 51/128 (39%)
 Frame = +1

Query: 118 DREEMAKATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXX 297
           D ++ AK     +SDV+S  G+    K ++ L ++G  + ++                  
Sbjct: 176 DVDDKAKKNADVESDVES--GELVPGKEYEGLEIDGPEDGKTLKDDRRHAKKGKKDKGSD 233

Query: 298 XXXDSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTI 477
                   +KIK+  +SD +  +N K + +       D ++ YDE   +  +K  +  T 
Sbjct: 234 AKSHGKSSRKIKLGHDSDSDHDDNKKKKKNSRYGSEDDSEAKYDEKKHSKHLKNSRHDTD 293

Query: 478 PSAQKKRK 501
             ++   K
Sbjct: 294 DDSESDHK 301


>07_01_0887 +
           7380332-7380370,7381286-7381640,7382752-7382886,
           7383029-7383138
          Length = 212

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +1

Query: 307 DSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTIPSA 486
           D+ K KKI+   +++  +K+ + + +S +   +  +DS   ES L+    Q    + P +
Sbjct: 40  DNLKTKKIEGNMQANNSIKDQTSNSISSSINRVSLEDSNGKESVLSRENTQSNLSSQPKS 99

Query: 487 QKK 495
            KK
Sbjct: 100 SKK 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.307    0.124    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,070,717
Number of Sequences: 37544
Number of extensions: 160479
Number of successful extensions: 366
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)