Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_C13
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein. 34 0.38
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 32 1.5
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 32 1.5
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 32 2.0
BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like fami... 31 3.6
BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like fami... 31 3.6
BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like fami... 31 3.6
BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like fami... 31 3.6
U03644-1|AAA17853.1| 451|Homo sapiens recepin protein. 30 6.2
>BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein.
Length = 426
Score = 34.3 bits (75), Expect = 0.38
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = +1
Query: 136 KATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXXXXXDSP 315
K + N SD + E +S K+KLH+EL + + +++++P DS
Sbjct: 298 KCSGHNNSDSE-EKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSD 356
Query: 316 KKKKI-KVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTIPSAQK 492
KK + K PE + R ++ S SY R +++ P ++
Sbjct: 357 KKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRSRSPGSY-KQRETRKRAQRNPGEEQ 415
Query: 493 KRKKNHK 513
RKK K
Sbjct: 416 SRKKKKK 422
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +1
Query: 136 KATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXXXXXDSP 315
K + N SD + E +S K+KLH+EL + + +++++P DS
Sbjct: 298 KCSGHNNSDSE-EKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSD 356
Query: 316 KKKKI-KVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQT 468
KK + K PE K S+ + ++ H ++ S S KQ +T
Sbjct: 357 KKSRTHKHSPE-----KRGSERKEGSSRSHGREERSRRSRSRSPGSYKQRET 403
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +1
Query: 136 KATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXXXXXDSP 315
K + N SD + E +S K+KLH+EL + + +++++P DS
Sbjct: 298 KCSGHNNSDSE-EKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSD 356
Query: 316 KKKKI-KVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQT 468
KK + K PE K S+ + ++ H ++ S S KQ +T
Sbjct: 357 KKSRTHKHSPE-----KRGSERKEGSSRSHGREERSRRSRSRSPGSYKQRET 403
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 31.9 bits (69), Expect = 2.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 136 KATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXXXXXDSP 315
K + N SD + E +S K+KLH+EL + +++++P DS
Sbjct: 298 KCSGHNNSDSE-EKDKSKKRKLHEELSSTHHNREKAKEKPRFLKHESSREDSKWSHSDSD 356
Query: 316 KKKKI-KVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQT 468
KK + K PE K S+ + ++ H ++ S S KQ +T
Sbjct: 357 KKSRTHKHSPE-----KRGSERKEGSSRSHGREERSRRSRSRSPGSYKQRET 403
>BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 584 DSAITLLFSVFDSISFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 438
++A T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 592 NTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 584 DSAITLLFSVFDSISFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 438
++A T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 592 NTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 584 DSAITLLFSVFDSISFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 438
++A T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 592 NTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 584 DSAITLLFSVFDSISFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 438
++A T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 592 NTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>U03644-1|AAA17853.1| 451|Homo sapiens recepin protein.
Length = 451
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 136 KATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXXXXXXXXDSP 315
K + N SD + E +S K+KLH+EL + +++++P DS
Sbjct: 299 KCSGHNNSDSE-EKDKSKKRKLHEELSSTHHNREKAKEKPRFLKHESSREDSKWSHSDSD 357
Query: 316 KKKKI-KVEPE 345
KK + K PE
Sbjct: 358 KKSRTHKHSPE 368
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.307 0.124 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,080,969
Number of Sequences: 237096
Number of extensions: 998852
Number of successful extensions: 2122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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