Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_C13
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 30 1.6
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 29 2.9
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 29 2.9
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 28 6.6
U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical p... 28 6.6
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.6
Identities = 30/140 (21%), Positives = 55/140 (39%)
Frame = +1
Query: 94 SDASIDTSDREEMAKATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXX 273
SD+S D R++M + D E + KKK K+ + E E E +D+
Sbjct: 113 SDSSEDKKKRKQMRDKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEE-EQKDKKKKDEKN 171
Query: 274 XXXXXXXXXXXDSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRV 453
D KKK K + + D + + K + +++ DDD ++ + +
Sbjct: 172 DDD--------DEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKK 223
Query: 454 KQEQTFTIPSAQKKRKKNHK 513
K++ + K+K K
Sbjct: 224 KKDDKDDDENEDDKKKDKKK 243
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/132 (20%), Positives = 46/132 (34%)
Frame = +1
Query: 109 DTSDREEMAKATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPXXXXXXXXXXX 288
D D + K + D D + + KKK K+ + E + D+
Sbjct: 210 DDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKK--KDDKEKDDDDEEEKDKKKKDKKK 267
Query: 289 XXXXXXDSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQT 468
D K KK K + + D E ++N K + D+D ++ K++
Sbjct: 268 NDDDEEDKKKDKKKKKDDDDD-EDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDD 326
Query: 469 FTIPSAQKKRKK 504
+KK KK
Sbjct: 327 DDDDEKEKKDKK 338
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 307 DSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTIPSA 486
D PKK++ K E E E K + + V ++ DDS DE + K++ +
Sbjct: 88 DEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEE-KKDDSKRDEKKKDGEKKEDDENKEDNE 146
Query: 487 QKKRKK 504
+KK +K
Sbjct: 147 KKKEEK 152
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 346 SDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQ 465
S++ ++++ HRL+VNQ +PD S+ E +L +QE+
Sbjct: 344 SNVNIESHDMHRLNVNQS-MPDRRSSQIEEIKSLLEEQEE 382
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 337 EPESDIELKNNSKHRLSVNQQHLPDDDSTYDES 435
E ESD E++ K+ L+ Q L DD++ +D +
Sbjct: 10 ESESDEEMETQQKNSLAPQNQQLVDDEAFFDNT 42
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 346 SDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQ 465
S++ ++++ HRL+VNQ +PD S+ E +L +QE+
Sbjct: 344 SNVNIESHDMHRLNVNQS-MPDRRSSQIEEIKSLLEEQEE 382
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 VEP-ESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTIPSAQKK 495
VEP E D ++ ++S+H N++H D ++ S R+++E+ F + QK+
Sbjct: 193 VEPTEGDEQMASSSEHITKDNEEHHVDHQEHHEVSDEERRIEEER-FRLEEEQKR 246
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 307 DSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDD--DSTYDESYLNLRVKQEQTFTIP 480
DS K +K E E D + + + + ++L DD D T D+S + R + + P
Sbjct: 265 DSGKSQKEDEEEEDDDDDDDEEEEENVEDDENLEDDEDDRTEDQSSIRCRQSESENINFP 324
Query: 481 SAQ 489
Q
Sbjct: 325 DFQ 327
>U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical
protein T28D9.1 protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +1
Query: 106 IDTSDREEMAKATNINQSDVDSEYGQSYKKKLHKELFV-NGEHETESRDQPXXXXXXXXX 282
ID E+ + T Q++ E ++ ++ K+ V NGE + + +
Sbjct: 34 IDEKTSEQNGEKTEETQAEATEEKNETEAEEADKDKAVENGEAKDTNGNDRKRVSSAHEE 93
Query: 283 XXXXXXXXDSPKKKKIKVEPESDI 354
D+P KK KVE E D+
Sbjct: 94 APVADAEEDAPLTKKSKVEDEVDV 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.124 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,915,267
Number of Sequences: 27780
Number of extensions: 182560
Number of successful extensions: 603
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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