Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_C11
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical ... 31 0.54
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.71
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 0.71
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 31 0.71
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 31 0.71
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.94
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.94
U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 1.2
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 2.2
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.2
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75534-1|CAH04713.2| 326|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 2.9
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 2.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 2.9
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 29 2.9
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 2.9
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 2.9
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 28 5.0
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 5.0
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 28 5.0
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 28 5.0
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 28 5.0
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 28 5.0
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear recep... 28 6.7
AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear recep... 28 6.7
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81549-10|CAI79203.1| 128|Caenorhabditis elegans Hypothetical p... 27 8.8
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68134-3|CAA92225.1| 97|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 27 8.8
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 27 8.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 27 8.8
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 27 8.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 8.8
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 8.8
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 8.8
>U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical
protein C17H11.2 protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 349 KPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSK 525
+PV+ R CT+ + KP + ++L K + ++ + TP+ K +++ C K
Sbjct: 680 QPVSRSDVQRVFGVGVCTNQSNKPCADAAGEALLEKTSKEQDVETPAEKMKDDKDGCDK 738
>AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical
protein Y102A5C.17 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 337 TIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 516
T +++ T +T T +T+ T+ P P P+ +Q P T R+ S R N +
Sbjct: 44 TQQVETTTTTTTTTTTTTTSTTTTTPIPCPTDWEQFERPSGTWCIRVFVGSGPRSNADSM 103
Query: 517 CS 522
CS
Sbjct: 104 CS 105
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 283 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 462
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 371 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 427
Query: 463 SQRRIATP 486
SQ I TP
Sbjct: 428 SQSTI-TP 434
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 283 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 462
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 578 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 463 SQRRIATP 486
SQ I TP
Sbjct: 635 SQSTI-TP 641
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 283 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 462
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 578 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 463 SQRRIATP 486
SQ I TP
Sbjct: 635 SQSTI-TP 641
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP-- 486
SPV S++ P T ST + T + + + S G + S ++TSQ TP
Sbjct: 877 SPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQGSTSPGISTTSEEMTSQGSTQTPGS 936
Query: 487 --SAKRQNNNIQCSKTVGCKLECNTRPGSVSSV 579
S Q + + S + G + + GS S +
Sbjct: 937 TGSTVTQPSTVSDSTSSGSTVTVGSTEGSSSPI 969
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 367 RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKL 543
RS T +P H+ K GQ+S+S + + + RQ N + CS G K+
Sbjct: 79 RSLTTPPLAPALKHSAKDGHYRGQRSMSLGGPAHEMLMSQLGGRQGNTVDCSPGEGDKV 137
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 367 RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKL 543
RS T +P H+ K GQ+S+S + + + RQ N + CS G K+
Sbjct: 176 RSLTTPPLAPALKHSAKDGHYRGQRSMSLGGPAHEMLMSQLGGRQGNTVDCSPGEGDKV 234
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 283 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 459
A ST ++ S++ VT + + +TSP TS P+P P++ L+P L
Sbjct: 287 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTL 345
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 283 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 459
A ST ++ S++ VT + + +TSP TS P+P P++ L+P L
Sbjct: 269 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTL 327
>U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical
protein F52E1.5 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 325 LSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 486
LSSST KP+T +T +T+ T+ APS+ ++ K+T + +TP
Sbjct: 74 LSSSTTSPKPITTTETTTRSTTTTTTTTTTTAAPSTTTSTV--KITPKPLRSTP 125
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 313 SPVPLSS--STIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSS 432
SP P SS ST + PV+ C S+R S S +P P P++
Sbjct: 1416 SPPPSSSRFSTPPVSPVSSCPSSRFSSPSATRPQSPDPVPAA 1457
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +1
Query: 382 HSTSPCTSHA--PKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNT 555
+ST P T A PK + ++ + PK+ ++ T A ++ NN+Q + E N
Sbjct: 1035 NSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDASQEPNNVQVTNVRKVSQESNA 1094
Query: 556 -------RPGSVSSVKPVN 591
RPG + + P N
Sbjct: 1095 ESVQSIPRPGGIIVMSPTN 1113
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +1
Query: 382 HSTSPCTSHA--PKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNT 555
+ST P T A PK + ++ + PK+ ++ T A ++ NN+Q + E N
Sbjct: 1035 NSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDASQEPNNVQVTNVRKVSQESNA 1094
Query: 556 -------RPGSVSSVKPVN 591
RPG + + P N
Sbjct: 1095 ESVQSIPRPGGIIVMSPTN 1113
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 277 WNARSTKRWKRASP--VPLSSSTIKMK-PVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSL 447
WN +++K + P P+ S P TR S + P P PSSG + +
Sbjct: 527 WNQTPVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGI 586
Query: 448 SP 453
+P
Sbjct: 587 AP 588
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 277 WNARSTKRWKRASP--VPLSSSTIKMK-PVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSL 447
WN +++K + P P+ S P TR S + P P PSSG + +
Sbjct: 353 WNQTPVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGI 412
Query: 448 SP 453
+P
Sbjct: 413 AP 414
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 316 PVPLSSSTIKMKP--VTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 483
P +SST KP T ST ST+ T+ PKP S+ + + T+ AT
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 316 PVPLSSSTIKMKP--VTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 483
P +SST KP T ST ST+ T+ PKP S+ + + T+ AT
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 283 ARSTKRWKRASP-VPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 459
A++T +R SP +S+T KP T +T + T+ AP + +P+
Sbjct: 287 AQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAPTTTTVEDVTTRAPRT 346
Query: 460 TSQRRIATPSA 492
+RR A+ S+
Sbjct: 347 ECERRRASASS 357
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 98 HRDKQLD*RKQIQR*KDEE*RH*GATAAAYEDDQEDNETGSRQGDRHVPRGRTELEQRA 274
HRD + D + +R +++ R+ E + DNE G R+ + PR R E ++R+
Sbjct: 420 HRDDRRD--RDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRS 476
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 98 HRDKQLD*RKQIQR*KDEE*RH*GATAAAYEDDQEDNETGSRQGDRHVPRGRTELEQRA 274
HRD + D + +R +++ R+ E + DNE G R+ + PR R E ++R+
Sbjct: 414 HRDDRRD--RDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRS 470
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 489
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 490 AKRQNNNIQCSKT 528
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>Z75534-1|CAH04713.2| 326|Caenorhabditis elegans Hypothetical
protein F08A10.2 protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 151 FIFSALYLFSLIELFVAMIY 92
FIFSA+YLFSL +F +Y
Sbjct: 20 FIFSAIYLFSLFIMFPIYVY 39
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 PVPLSSSTIKMKPVTLC-RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 483
P+P+ SST KM+ T+C + P AP P P+ ++ K +R+ T
Sbjct: 399 PIPVDSSTKKMRNDTVCIPPPEVSAVVPPDGWAPIPVPAPTKKPKVSKKEKERKKKT 455
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 340 IKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 516
+++ V+ + ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 715 LQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 773
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 340 IKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 516
+++ V+ + ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 715 LQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 773
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Frame = +1
Query: 394 PCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNTR---PG 564
P AP P P SLSP + I PS+ + NI R P
Sbjct: 24 PSPRRAPPPPPHRKPASLSPPPDDENTIRPPSSSESSENIPEEPQELITPNTTRRSLGPK 83
Query: 565 SVSSVKP--VNVLWVSATVCDVSFNNS 639
+ KP +N L S++ DVS NS
Sbjct: 84 PTVAPKPLFLNGLLPSSSTSDVSSQNS 110
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 295 KRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRR 474
KRW R +S +K P ++ R+ +P + PK A SG + SP RR
Sbjct: 92 KRWGRDPRSVSPTSPVKKTPTDSAKNKRSSVVTPTSPPVPKKA-KSGTSTTSPFAFLNRR 150
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 489
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 490 AKRQNNNIQCSKT 528
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 489
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 490 AKRQNNNIQCSKT 528
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 304 KRASPVPLSSSTIKMKPVTLCRSTRTHSTSP 396
K SP+ + + ++ + LCRSTR++S P
Sbjct: 459 KNKSPIEVEEAIEELPKLPLCRSTRSNSIKP 489
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 370 STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 516
+ ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 362 AAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 410
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 370 STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 516
+ ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 746 AAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 794
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 322 PLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTS 465
P +++T+ P T+ + +T+ TS PKPA ++ L LTS
Sbjct: 507 PATAATLGQTPSTVSATPSLPTTTSTTSTLPKPAEATPTLGLGLGLTS 554
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 286 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 444
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 286 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 444
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 286 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 444
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 286 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 444
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 27.9 bits (59), Expect = 6.7
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Frame = +1
Query: 286 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL-- 459
RST + P+ + T +P T + S TS +P+PS +++ P +
Sbjct: 460 RSTSSRRNQEPITI---TYIGRPRTPSEGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYA 516
Query: 460 ----TSQRRIAT---PSAKRQNNNIQCSKTVGCKLECNTRPGSVSSVKPVNVL 597
++R +T P+A+RQN+ + T K + +V + ++
Sbjct: 517 ITSSPAKRASSTASGPTARRQNSTSSVTSTTSAKTPVGVWGACIETVHDIGIV 569
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 246 EDAQNSSNELLERKIYEEMEACQSG 320
E++QNSS EL ++ MEAC +G
Sbjct: 589 EESQNSSTELNHSRLTPLMEACTNG 613
>U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical
protein B0554.5 protein.
Length = 468
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 547 IQACTQRSWSTGCCCSAAWHSV*QCAVAKSASGLETAVQ 431
I++ SWS GCCC ++ S+S E V+
Sbjct: 136 IESNVSLSWSVGCCCMILGSAIMATITRLSSSSTEIIVE 174
>AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear receptor
NHR-2 protein.
Length = 474
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 319 VPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKR 498
VP +++ P + ++TSP + + + SG ++SP LTSQ TP+
Sbjct: 56 VPGTATNSTYMPPQSKNTVTPNATSPLSQISDR---DSGNDTISPPLTSQNSATTPNYHN 112
Query: 499 Q 501
Q
Sbjct: 113 Q 113
>AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear receptor
NHR-2 protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 319 VPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKR 498
VP +++ P + ++TSP + + + SG ++SP LTSQ TP+
Sbjct: 52 VPGTATNSTYMPPQSKNTVTPNATSPLSQISDR---DSGNDTISPPLTSQNSATTPNYHN 108
Query: 499 Q 501
Q
Sbjct: 109 Q 109
>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical protein
R06A4.8 protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 550 CIQACTQRSWSTGCCCSA 497
C+Q+C ++WS GC A
Sbjct: 1441 CMQSCAAQAWSVGCLIEA 1458
>Z81549-10|CAI79203.1| 128|Caenorhabditis elegans Hypothetical
protein F55C9.12 protein.
Length = 128
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 292 TKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSS 432
T RWKR++ VPL S + P L T + + T AP+ P +
Sbjct: 18 TGRWKRSADVPLPSPSPPPPPQQLTPDTFPEAEAVATG-APQSPPKT 63
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 289 STKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAP 414
STK S + SST K+ P+ + +S+ ++ +P TS AP
Sbjct: 591 STKTPITPSLITTRSSTTKLSPIVITKSSLAYTATP-TSAAP 631
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSA 492
SP P + + P R R+ S S APK A S + + + S +P A
Sbjct: 328 SPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPA 387
Query: 493 KRQNNNIQCSKTVGCKLE 546
R+ + S++ K E
Sbjct: 388 PRRRRSPSKSRSPAPKRE 405
>Z68134-3|CAA92225.1| 97|Caenorhabditis elegans Hypothetical
protein T27A8.4 protein.
Length = 97
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 188 EDDQEDNETGSRQGDRHVPRG--RTELEQRAIGTQDLRRDGSVPVRCRF 328
ED+ + ET S G+ P G TE+E A QD+ D ++C F
Sbjct: 47 EDEIQQVETQSDDGNYSPPSGTPETEVETPASQPQDVEDDMDTDMQCWF 95
>Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical
protein F22B5.3 protein.
Length = 389
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 262 EFCASSWHVSIALAGTRFVVFLIIFIS 182
E C SS+H+S+ VF+ IFI+
Sbjct: 345 ELCISSFHISVVTVFLGLTVFVAIFIT 371
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 295 KRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRR 474
K K+ + P + T + P T R+ T+P T PAP+ + + P +
Sbjct: 105 KEPKKTTQAPTTIRTTRPPPATTIRTIPFVQTTPATFATLPPAPAVTRAPIQPFVPQTVA 164
Query: 475 IATPSAKR 498
PS R
Sbjct: 165 TIAPSFVR 172
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 304 KRASPV--PLSSSTIKMKPVTLCRST-RTHSTSPCTSHAPKPAPSSGQQSLSP 453
K A P+ ++ ST+ +P L S R H + P P PAP G+Q+ P
Sbjct: 730 KEALPIISEVNMSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMP 782
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +1
Query: 313 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 462
S +P P+T +T T +T+ T+ P P P+ +Q P T
Sbjct: 15 SCIPTQQIETTSAPITTTTTTTTTTTTSTTTTTPIPCPTGWEQFERPSGT 64
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 304 KRASPV--PLSSSTIKMKPVTLCRST-RTHSTSPCTSHAPKPAPSSGQQSLSP 453
K A P+ ++ ST+ +P L S R H + P P PAP G+Q+ P
Sbjct: 730 KEALPIISEVNMSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMP 782
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 328 SSSTIKMKPVTLCRSTRTH-STSPCTSHAPKPAPSSG 435
+ ST+ P ++T+ H S SP T HA P P +G
Sbjct: 122 TQSTLSTCPAITKKTTKLHLSASPQTGHAVLPYPFTG 158
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 316 PVPLSSSTIKMKPVTLCRSTRTHSTSP--CTSHAPKPAPSSGQQSLSPKLTSQRRIATPS 489
P+P SS + S STS TS PS+ S++P+ T ++
Sbjct: 198 PLPPLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSSSSMAPRKTPPNASSSSL 257
Query: 490 AKRQNNNIQCSKTVGCKLECN 552
KRQ+ ++Q + V ++ N
Sbjct: 258 IKRQSQDVQEQQRVDFEVARN 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,755
Number of Sequences: 27780
Number of extensions: 322463
Number of successful extensions: 1723
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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