Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C03
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 310 LWQRMRILTLKKLKRLY 360
           LW R R    KKL R+Y
Sbjct: 60  LWTRRRYAGRKKLSRMY 76


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 96  LNLFNNTFHLKFTITICSQQMLTRSR 19
           L +  NT  +  T+T+C   +L   R
Sbjct: 284 LCILTNTLEILITVTVCELTILEYKR 309


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 96  LNLFNNTFHLKFTITICSQQMLTRSR 19
           L +  NT  +  T+T+C   +L   R
Sbjct: 109 LCILTNTLEILITVTVCELTILEYKR 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,603
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)