Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C03
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81516-1|CAB04203.1|  521|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
           protein C05C9.3 protein.
          Length = 1225

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +3

Query: 198 VQTSDDSVVGSVLDTREETRR*SLGNDEEGDRLRM*YALAAHENINLKEAEETL 359
           V   DD  +G++ + +  T+R S  ++EE D L + +A + +  I  KEAEE +
Sbjct: 330 VVIDDDDDIGNIQEDKTNTKRQSAEDEEECD-LNV-WAFSCNSTIEHKEAEELI 381


>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
           protein C18C4.5b protein.
          Length = 1046

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 163 QKDISNVDELDKFKRRMIRSLARSLIHEKKPEDEVWEMMKKE 288
           QK I N+DE  K +   IR L RSL   K+   ++ E  + E
Sbjct: 356 QKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNE 397


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
           protein C18C4.5a protein.
          Length = 1022

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 163 QKDISNVDELDKFKRRMIRSLARSLIHEKKPEDEVWEMMKKE 288
           QK I N+DE  K +   IR L RSL   K+   ++ E  + E
Sbjct: 356 QKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNE 397


>Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical
           protein C10C6.7a protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 323 MRCQSILHPQPVSFFIISQTSS--SGFFSC 240
           +R  S +HP  +  FIIS TS   S +F+C
Sbjct: 84  LRRSSHIHPNGIKMFIISSTSDNFSNYFNC 113


>Z81516-1|CAB04203.1|  521|Caenorhabditis elegans Hypothetical
           protein F26H9.2 protein.
          Length = 521

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +1

Query: 148 PPTKNQKDISNVDELDKFKRRMIRSLARSLIHEKKPEDEVWEMMKKETGCGCNMLWQRMR 327
           PP KN  +    D+  K  +     LAR L     PE+     + +  G   +   +  R
Sbjct: 368 PPCKNDINGQTADDRKKLMKTASIKLARKLSERPTPEELEDRNILRRRGMTSSEAMEEKR 427

Query: 328 ILTLKKL 348
            L L+KL
Sbjct: 428 KLLLRKL 434


>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical protein
            F18C5.3 protein.
          Length = 1490

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 358  YAADDKIKNVPTVARMTQTDWLLFDLIVVHEKIDFIDKDQMTL 486
            Y++  +  N P + ++ Q  +  F  ++V    DF+D D++TL
Sbjct: 953  YSSIGQAGNKPAIIQLNQLIYKGFTNLIVTTGSDFLDNDKLTL 995


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,215,692
Number of Sequences: 27780
Number of extensions: 258141
Number of successful extensions: 638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)