Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_C02
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73896-7|CAO82025.1|  310|Caenorhabditis elegans Hypothetical pr...   104   6e-23
Z73896-6|CAA98055.1|  356|Caenorhabditis elegans Hypothetical pr...   104   6e-23
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    29   2.2  
U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z82058-6|CAB04868.2|  163|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z73896-7|CAO82025.1|  310|Caenorhabditis elegans Hypothetical
           protein F09E8.2b protein.
          Length = 310

 Score =  104 bits (249), Expect = 6e-23
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
 Frame = +1

Query: 280 STDKNINVLNE-CQQCKVLTDSFNYWFKKTSRGKYEGGDVAWEEAKLKTYARSEVRLVEI 456
           ++ K + + NE C+ C  L  +F+   KKT+R  + GGD AWEE  L  Y  SE RL+E+
Sbjct: 15  TSQKEVTIKNEKCRTCNFLVSTFDEGLKKTARHHFAGGDTAWEEKNLGKYKTSETRLIEV 74

Query: 457 QEGLCSELK-ANKDQCYSLADVA----------ENVLENWYYSEDHDTVNLYTWLCIQKL 603
            EG+C +    N D    +A++           E  +E +YY++ H+  N+  WLC+++L
Sbjct: 75  LEGVCKKSSLPNMDNFMGIAEIEFKCSTQLEKHEETIEEFYYNQQHN--NMSNWLCVEQL 132

Query: 604 QNCCPLSHYGESCSPC 651
           + CCP  H+G++C  C
Sbjct: 133 KLCCPDGHFGKNCEQC 148


>Z73896-6|CAA98055.1|  356|Caenorhabditis elegans Hypothetical
           protein F09E8.2a protein.
          Length = 356

 Score =  104 bits (249), Expect = 6e-23
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
 Frame = +1

Query: 280 STDKNINVLNE-CQQCKVLTDSFNYWFKKTSRGKYEGGDVAWEEAKLKTYARSEVRLVEI 456
           ++ K + + NE C+ C  L  +F+   KKT+R  + GGD AWEE  L  Y  SE RL+E+
Sbjct: 15  TSQKEVTIKNEKCRTCNFLVSTFDEGLKKTARHHFAGGDTAWEEKNLGKYKTSETRLIEV 74

Query: 457 QEGLCSELK-ANKDQCYSLADVA----------ENVLENWYYSEDHDTVNLYTWLCIQKL 603
            EG+C +    N D    +A++           E  +E +YY++ H+  N+  WLC+++L
Sbjct: 75  LEGVCKKSSLPNMDNFMGIAEIEFKCSTQLEKHEETIEEFYYNQQHN--NMSNWLCVEQL 132

Query: 604 QNCCPLSHYGESCSPC 651
           + CCP  H+G++C  C
Sbjct: 133 KLCCPDGHFGKNCEQC 148


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 289 KNINVLNECQQCKVLTDSFNYWFKKTSR 372
           +N++VL  C+  ++L   F +W KKT +
Sbjct: 276 QNLDVLQFCRHLRILEKIFTFWKKKTQK 303


>U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical
           protein F56D2.5 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 577 YTWLCIQKLQNCCPLSHYGESCS 645
           + WLC + L N  P SHY E  S
Sbjct: 394 FCWLCSKTLNNVDPYSHYSEKGS 416


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 610 CCPLSHYGESCSPC 651
           CCP SH+   C PC
Sbjct: 195 CCPYSHHRRLCDPC 208


>Z82058-6|CAB04868.2|  163|Caenorhabditis elegans Hypothetical
           protein T27C5.7 protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 651 ARRTGFSIMGQRTAVL*FLNTQPCIQIN 568
           A+RTG  I    TA    LN++PC+ +N
Sbjct: 111 AQRTGACISSGLTATCTALNSEPCVTLN 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,939,563
Number of Sequences: 27780
Number of extensions: 286378
Number of successful extensions: 691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)