Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_B18
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.              199   8e-51
BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.      199   8e-51
AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.             199   8e-51
AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase...   198   2e-50
Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A synth...   121   3e-27

>CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.
          Length = 333

 Score =  199 bits (485), Expect = 8e-51
 Identities = 90/135 (66%), Positives = 103/135 (76%)
 Frame = +2

Query: 248 K*LFRXFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 427
           K + + FTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TGATAS
Sbjct: 44  KIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGATAS 103

Query: 428 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGII 607
           VIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+RL+GPNCPG+I
Sbjct: 104 VIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNCPGVI 163

Query: 608 APEKCKIGIMPAAVH 652
            P +CKIGIMP  +H
Sbjct: 164 NPGECKIGIMPGHIH 178


>BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.
          Length = 333

 Score =  199 bits (485), Expect = 8e-51
 Identities = 90/135 (66%), Positives = 103/135 (76%)
 Frame = +2

Query: 248 K*LFRXFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 427
           K + + FTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TGATAS
Sbjct: 44  KIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGATAS 103

Query: 428 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGII 607
           VIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+RL+GPNCPG+I
Sbjct: 104 VIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNCPGVI 163

Query: 608 APEKCKIGIMPAAVH 652
            P +CKIGIMP  +H
Sbjct: 164 NPGECKIGIMPGHIH 178


>AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.
          Length = 333

 Score =  199 bits (485), Expect = 8e-51
 Identities = 90/135 (66%), Positives = 103/135 (76%)
 Frame = +2

Query: 248 K*LFRXFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 427
           K + + FTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TGATAS
Sbjct: 44  KIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGATAS 103

Query: 428 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGII 607
           VIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+RL+GPNCPG+I
Sbjct: 104 VIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNCPGVI 163

Query: 608 APEKCKIGIMPAAVH 652
            P +CKIGIMP  +H
Sbjct: 164 NPGECKIGIMPGHIH 178


>AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase
           alpha subunit protein.
          Length = 333

 Score =  198 bits (482), Expect = 2e-50
 Identities = 90/135 (66%), Positives = 102/135 (75%)
 Frame = +2

Query: 248 K*LFRXFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 427
           K + + FTGKQGTFHSQQAL+YGTK+VGG  P K G  HLG PVF TVKEAK  TGATAS
Sbjct: 44  KIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFNTVKEAKEQTGATAS 103

Query: 428 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGII 607
           VIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+RL+GPNCPG+I
Sbjct: 104 VIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNCPGVI 163

Query: 608 APEKCKIGIMPAAVH 652
            P +CKIGIMP  +H
Sbjct: 164 NPGECKIGIMPGHIH 178


>Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A
           synthetase protein.
          Length = 132

 Score =  121 bits (291), Expect = 3e-27
 Identities = 57/89 (64%), Positives = 64/89 (71%)
 Frame = +2

Query: 248 K*LFRXFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 427
           K + + FTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TGATAS
Sbjct: 44  KIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGATAS 103

Query: 428 VIYVPPPGXXXXXXXXXXXXMPLIVCITE 514
           VIYVPPP             +PL+VCITE
Sbjct: 104 VIYVPPPFAAAAINEAIEAEIPLVVCITE 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,767,114
Number of Sequences: 237096
Number of extensions: 2122586
Number of successful extensions: 4029
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)