Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_B16
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.1  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    24   3.4  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   6.0  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    23   7.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.9  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 317 LCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDA 466
           L +V + K ++ ET K   K+RN E     ++ +R + +  N +  VKDA
Sbjct: 434 LSQVEQRKQAV-ETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDA 482


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 86  GPLCGLVVREYRHDRSWRES 27
           GP+     R Y H R W+E+
Sbjct: 114 GPIADACERAYSHHRCWKET 133


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -2

Query: 522 KRNSLGVSKFVSFMTSLPSASLTFSISFLLIAIFLSVADFL 400
           K  +L +  F+SF  S+P +    ++   +  + L+V +F+
Sbjct: 291 KGANLDLMSFISFKVSIPKSLKDLALQSTIWPVSLTVREFV 331


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 474 LPSASLTFSISFLLIAIFLSVAD 406
           L +ASLT S+S     I LSVAD
Sbjct: 35  LATASLTASLSIPAECIVLSVAD 57


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 201 NGFDRMIPLSVFVVPSTTFNGSCVCIDKSPLARPSCDV 88
           N   +++PL+ F++P   F  S        +A+ +C V
Sbjct: 783 NVVQKVVPLNTFLLPKLWFVASVCGARAMDIAKVTCTV 820


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 272  ACPKTDQLANVTKYELCRVAEAKLSLNET 358
            AC   D+  +   +   R AE +L LNE+
Sbjct: 973  ACKDEDETVDHVMFHCPRFAEERLQLNES 1001


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,364
Number of Sequences: 2352
Number of extensions: 11921
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)