Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_B14
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 361 e-101
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 2e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 2e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 4e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 4e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 7e-20
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 1e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 3e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 2e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 2.4
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 3.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.1
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 9.5
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 25 9.5
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 361 bits (887), Expect = e-101
Identities = 176/185 (95%), Positives = 185/185 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 633 KIQDK 647
KIQDK
Sbjct: 181 KIQDK 185
Score = 361 bits (887), Expect = e-101
Identities = 176/185 (95%), Positives = 185/185 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256
Query: 633 KIQDK 647
KIQDK
Sbjct: 257 KIQDK 261
Score = 361 bits (887), Expect = e-101
Identities = 176/185 (95%), Positives = 185/185 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 332
Query: 633 KIQDK 647
KIQDK
Sbjct: 333 KIQDK 337
Score = 301 bits (740), Expect = 4e-83
Identities = 146/153 (95%), Positives = 153/153 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 551
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG-MQIFVKTLTGK 353
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG-MQIFVKTLTGK 581
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 647
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK 33
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG-MQIFVKTLTGK 353
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG-MQIFVKTLTGK 581
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 647
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK 33
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG 320
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG 548
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 647
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK 33
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG 320
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG 548
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 647
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK 33
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 7e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 273 IQKESTLHLVLRLRGG 320
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 7e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 501 IQKESTLHLVLRLRGG 548
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 647
M I VKTLTGK I L+++ +D + +K ++++K
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEK 33
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +3
Query: 87 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 266
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 267 YNIQKESTLHLVLRL 311
Y IQ ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 43.2 bits (97), Expect = 3e-05
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 501 IQKESTLHLVLRLRGGMQIFVKTLTGKT--ITLEVEASDTIENVKAKIQDKR 650
IQ ++HLV L ++ +T + ++A N A + R
Sbjct: 64 IQDGHSIHLVKTLGQNPAAAATNVSDRTQQVPTNIQAGQGANNPLANLTSAR 115
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 123 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 284
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 351 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 512
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 120 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 348 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 521
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.4
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Frame = -2
Query: 634 FAFTFSMVSDASTSSVMVL-PVSVFTKICMPPLRRNTKCRVDSFWML*SDNVRPSSSCLP 458
F+ T S + +ST S +L P SV + I P + + + S + SD P +S
Sbjct: 121 FSPTSSEYTPSSTESSSLLDPSSVSSAIL--PSSTSVEVSISSSSLSSSD---PLTSSTF 175
Query: 457 AKINRC*SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTKICIPPLRRNTKWRVDSF 278
+ ++ S PS+S + TFS + STSS + SV + P ++ S
Sbjct: 176 SSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSL 235
Query: 277 *IL*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSN 134
+ SSS + +S S S S + + S++S +S+S+
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSS---SSSSSIISSSSSSS 280
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 96 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 269
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 270 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 359
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 324 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 497
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 498 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 587
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 617 NGVRCFNF*CDGFTGKCFHKDLHATS 540
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 407 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 312
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.1
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -2
Query: 436 SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTK-----ICIPPLRRNTKWRVDSF*I 272
S IPS + + ++ S A++S VSV T + +PP +T SF
Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTS----SFST 201
Query: 271 L*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSNVMVLPVRVFTKICM 92
+ + ++ PSSS F + G P + S++S AS S+ VLP + T
Sbjct: 202 ITNTSMIPSSSSFTT------TTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
Query: 91 VVSFWNS 71
V+ +S
Sbjct: 256 PVTVSSS 262
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 409 ILAFTFSMVSDASTSSVMVLPVSVFT 332
ILAF F +T +V VLPVS F+
Sbjct: 182 ILAFGFVNSFSGATDTVRVLPVSQFS 207
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.5
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Frame = +3
Query: 108 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA------GKQLE-------D 248
K TGKT + + + ++ K+KIQ +P + L + GK +
Sbjct: 89 KNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTG 148
Query: 249 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 428
G TL D I+ T+H+V+ G V L GK + E + + + K+ E
Sbjct: 149 GTTLRDDIIRLNDTVHIVVGTPGR----VLDLAGKGVADFSECTTFVMDEADKLLSPEFT 204
Query: 429 PPDQQRLIFAGK 464
P +Q L + K
Sbjct: 205 PIIEQLLSYFPK 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,660,753
Number of Sequences: 5004
Number of extensions: 54280
Number of successful extensions: 202
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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