Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_B12
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.17 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   2.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 301 MFTLPFVAFFGVHYLLSDYYHLETFVV 381
           +F  PF+  F VH+LL  YY    F++
Sbjct: 84  LFYCPFI-IFTVHFLLCTYYFYYAFII 109


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 18  FWLCP*IN--YEFRFLRLRNLKCSSTQSKYRD 107
           FWL P ++  YEF+ + L      S +S+Y D
Sbjct: 306 FWLSPAVDMFYEFQIIELMTSVVKSLESRYAD 337



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 36  INYEFRFLRLRNLKCSSTQSKYRD 107
           + YEF  + L N+   S +S+Y+D
Sbjct: 179 VYYEFLLISLINILIRSFKSRYKD 202


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 319 VAFFGVHYLLSD 354
           +AF+G H++LSD
Sbjct: 255 IAFYGHHFILSD 266


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 511 WECMNADQSRFHVHHILSHDK 449
           W C N + SR+     L++D+
Sbjct: 112 WNCWNGEASRYQCSPGLAYDR 132


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 511 WECMNADQSRFHVHHILSHDK 449
           W C N + SR+     L++D+
Sbjct: 112 WNCWNGEASRYQCSPGLAYDR 132


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 382 SPQMFPNGNN 353
           SP++FPN NN
Sbjct: 451 SPEVFPNTNN 460


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 382 SPQMFPNGNN 353
           SP++FPN NN
Sbjct: 399 SPEVFPNTNN 408


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 272 LQNYLSIVWLCSHYHLLHFLVFTTYSLIITIWKH 373
           ++NY   ++ C H  LL  ++     L   +W++
Sbjct: 138 IENYCQFLYNCFHSTLLLMILSRYQRLKAQLWQN 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,121
Number of Sequences: 336
Number of extensions: 2798
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)