Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_B12
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0504 - 19771191-19772134,19772210-19774892                       31   1.0  
01_03_0156 + 13279354-13279479,13279722-13279790,13280102-132802...    27   9.5  

>12_02_0504 - 19771191-19772134,19772210-19774892
          Length = 1208

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 538 RSFFRTLLDWECMNADQSRFHVHHILSHD 452
           +SFF  +L+ E  N DQ  ++V H L HD
Sbjct: 490 KSFFCPMLEAEPSNGDQKEYYVLHSLMHD 518


>01_03_0156 +
           13279354-13279479,13279722-13279790,13280102-13280272,
           13280358-13280464,13281332-13281437,13281540-13281586,
           13283429-13283747,13283917-13284006,13284095-13284157,
           13284303-13284377,13285379-13285441,13286677-13286700,
           13286926-13286978,13287687-13287861
          Length = 495

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 47  ISLSTIAKSKMFEHSVKVPRHYKIAANILKK 139
           I +   A+    +H +K+P +++IA N+L++
Sbjct: 12  IDIEACARPIAVDHRIKLPYYFRIAGNLLRQ 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,127,132
Number of Sequences: 37544
Number of extensions: 243136
Number of successful extensions: 454
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)