BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_B12
(638 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 6.2
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 23 8.2
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.4 bits (48), Expect = 6.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 280 LFVYSVAMFTLPFVAFFGVHYLLSDYYHLET 372
LFV +++F F+ + LLS +Y L T
Sbjct: 297 LFVIKISLFRTVFLRLSSLAVLLSRFYFLIT 327
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.0 bits (47), Expect = 8.2
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 235 LIPIQTKLAVIVLAKLFVYSVAMFTLPFVAFFGVHYLLSDYYHL--ETFVVT 384
L+PI L+V + V + +P+ + Y++ Y+++ ET +T
Sbjct: 135 LLPILCSLSVAITHVTMVDFKLLQVIPYCVLDTITYMMGGYWYMACETLSIT 186
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,400
Number of Sequences: 2352
Number of extensions: 11148
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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