Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_B05
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 92 3e-19
Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical p... 33 0.23
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 30 1.6
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 30 1.6
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 30 1.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 3.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 3.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 3.8
AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical ... 28 6.7
AL021503-2|CAA16421.1| 320|Caenorhabditis elegans Hypothetical ... 28 6.7
Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 27 8.8
U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine rece... 27 8.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF016442-4|AAB65915.1| 361|Caenorhabditis elegans Serpentine re... 27 8.8
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 8.8
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 171 PPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNN-PV-SAFYKALLANAATS 344
PP ++ ++ AN ++ L+ RV+TV + Y+ P P SA+YK A+AAT
Sbjct: 31 PPPAYSSISQYVSANTMECVLFAARVLTVFFALNYMIPFIGLVPAHSAYYKIFAASAATF 90
Query: 345 ALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAA 524
ALRLH RI + +L+ F+ R +EDS HYL YS++F+ P + +P+ ++A LHA
Sbjct: 91 ALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSMAALPVTIYAALHAC 149
Query: 525 SYSLTI 542
++ I
Sbjct: 150 TFMTKI 155
>Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical
protein T11F9.18 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 NNPVSAFYKALLANAATSAL-RLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 467
+ P++A Y L A+ L +L + R ISL R+F+ +++ + H +F S+
Sbjct: 201 SQPLAAVYFGLSVYASKLGLQKLKASLSQRTISLQRNFLHSLYIQTAVHVIFISIPLGIF 260
Query: 468 VPNLLILVPIFLFALLHA 521
+ +I +P + +L A
Sbjct: 261 FLSFIIWIPSNMSYILTA 278
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 341 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 454
F R L LA FHG+ +P G+ F + TH
Sbjct: 628 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 665
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 341 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 454
F R L LA FHG+ +P G+ F + TH
Sbjct: 577 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 614
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 341 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 454
F R L LA FHG+ +P G+ F + TH
Sbjct: 575 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 612
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 128 NQYGRSKSASRRHWSTKRHPSLESSHHCQ*NRRSSLGGPR 247
+ YGR ++SRR + ++ PS S+ H N R+SL P+
Sbjct: 161 DNYGREPASSRRPYPPQQPPS-TSAPHSSPNNRTSLYNPQ 199
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 338 DFSAAATSKNSSTRDLPLAGFHGEV 412
+F +TS +D+PL GFHGE+
Sbjct: 317 NFVLNSTSSFEPLKDVPLCGFHGEI 341
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 107 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 211
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 107 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 211
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 107 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 211
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 107 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 211
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical
protein Y37H2C.4 protein.
Length = 283
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 438 LFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTIXWILL 557
LFYSLI + +P+ L+ +P + ++ ++ + + LL
Sbjct: 202 LFYSLILQSAIPSFLMYLPATIVYIVPMLNFGYNVEFPLL 241
>AL021503-2|CAA16421.1| 320|Caenorhabditis elegans Hypothetical
protein Y68A4A.3 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 438 LFYSLIFMNVVPNLLILVP 494
LFYSLIF + +P LL+ +P
Sbjct: 239 LFYSLIFQSAIPCLLMYLP 257
>Z70753-3|CAA94768.1| 343|Caenorhabditis elegans Hypothetical
protein F40F9.4 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 438 LFYSLIFMNVVPNLLILVPIFLFAL 512
LFYSL+ ++P +L+ +PI ++ L
Sbjct: 241 LFYSLVLQTLIPFVLMHIPITIYYL 265
>Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical
protein M28.1 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 250 SPCCVPLDTCSHCLTIQCRHSTKRYSRTLRLQ 345
SP C PL TC+ C + R T+R + ++RL+
Sbjct: 233 SPDCPPLTTCAPCACEERR--TRRATNSIRLE 262
>U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine
receptor, class x protein2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 450 LIFMNVVPNLLILVPIFLFALLHAASYSLTIXWILLV 560
L F ++ NLL+++P+F A L S I +I +V
Sbjct: 17 LSFSGLIVNLLVVIPVFRLAFLQNKSPIYVISFINIV 53
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 649 DLGERRGPEDVPRLELDQ-GDEQTSHPQRILTKSIQXIVKEYEAACSSANKKIGT 488
D RR ++P E+ + +EQ +H + + + Q +++ EAA N + T
Sbjct: 831 DFTGRRNAREIPMEEISRLAEEQVAHEEYKIHRRRQVVLEAVEAASKKLNVYVDT 885
>AF016442-4|AAB65915.1| 361|Caenorhabditis elegans Serpentine
receptor, class n protein1 protein.
Length = 361
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 423 DSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASY 530
++ +L +F N++P ++I P+FL A SY
Sbjct: 247 ETHRHLTLLALFQNLIPAVVIAFPVFLVAFSFVMSY 282
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 647 SRRAPRPGGCSATGTRPGR*ADEPPTTN 564
S ++PRPGG S + R G A++P + N
Sbjct: 832 SSKSPRPGGPSTSSHRHGSHANDPRSHN 859
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,120
Number of Sequences: 27780
Number of extensions: 307346
Number of successful extensions: 1133
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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