Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_B03
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 247 2e-64
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 223 4e-57
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 220 2e-56
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 190 2e-47
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 170 2e-41
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 153 3e-36
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 144 2e-33
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 135 7e-31
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 124 2e-27
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 122 1e-26
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 118 1e-25
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 104 2e-21
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 68 7e-21
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 99 4e-20
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 97 3e-19
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 80 5e-14
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 79 9e-14
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 70 4e-11
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 70 4e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 69 7e-11
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 65 1e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 64 3e-09
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 63 6e-09
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 60 3e-08
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 57 4e-07
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 57 4e-07
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 56 5e-07
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 56 7e-07
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 54 3e-06
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 54 4e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 7e-06
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 51 2e-05
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 50 6e-05
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 43 0.005
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.7
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.7
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 7.5
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 7.5
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 7.5
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 10.0
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 32 10.0
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 247 bits (604), Expect = 2e-64
Identities = 119/184 (64%), Positives = 129/184 (70%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKGR
Sbjct: 15 LRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFKN
Sbjct: 75 HCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKN 134
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDEA 620
KRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 135 KRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDEI 194
Query: 621 XLTA 632
A
Sbjct: 195 AAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 223 bits (544), Expect = 4e-57
Identities = 103/179 (57%), Positives = 124/179 (69%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGR
Sbjct: 15 LRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFKN
Sbjct: 75 HMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKN 134
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 617
KR+LME+IH+ KA+KAR K+L+DQ +++T ++E+E
Sbjct: 135 KRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 220 bits (538), Expect = 2e-56
Identities = 100/144 (69%), Positives = 115/144 (79%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGR
Sbjct: 7 LRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGR 66
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFKN
Sbjct: 67 HMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKN 126
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQ 512
KR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 127 KRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 190 bits (464), Expect = 2e-47
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +3
Query: 87 CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHC 266
CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR+R RKN ARRKGRH
Sbjct: 17 CGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHT 76
Query: 267 GFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKR 446
G GKR+GTA+ARMPQK LW A KID+HLYH LY + KGN FKNKR
Sbjct: 77 GTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKR 136
Query: 447 VLMEYIHRKKAEKARTKMLSDQ 512
VL+++IH+KKAE+ R K LSDQ
Sbjct: 137 VLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 170 bits (414), Expect = 2e-41
Identities = 78/142 (54%), Positives = 99/142 (69%)
Frame = +3
Query: 87 CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHC 266
CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSRAR RK EA+ GRH
Sbjct: 37 CGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHN 96
Query: 267 GFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKR 446
G G+R G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR
Sbjct: 97 GVGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKR 156
Query: 447 VLMEYIHRKKAEKARTKMLSDQ 512
L+E+IH+ K EK + + L++Q
Sbjct: 157 NLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 153 bits (371), Expect = 3e-36
Identities = 78/154 (50%), Positives = 100/154 (64%)
Frame = +3
Query: 51 SCRRGLQPLXMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 230
S ++ L + CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+A
Sbjct: 5 SLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQAHCE 64
Query: 231 KNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLY 410
KNT KGRH GK +GTAN +P++ W +KKID H+ HSLY
Sbjct: 65 KNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLY 121
Query: 411 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 512
++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 122 LRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 144 bits (349), Expect = 2e-33
Identities = 64/144 (44%), Positives = 92/144 (63%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR R+R E + GR
Sbjct: 15 LNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G GKR+G+ N+R K +W + K++RHLY SLY+K+KGNVFKN
Sbjct: 75 HEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKN 134
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQ 512
K++L E+IH+ K E+ R + D+
Sbjct: 135 KKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 135 bits (327), Expect = 7e-31
Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 20/164 (12%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV------------------- 203
+ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 15 LNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFPTLRGFHAARAYFN 74
Query: 204 -AVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 380
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKK
Sbjct: 75 FQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKK 134
Query: 381 IDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 512
ID+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 135 IDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 124 bits (298), Expect = 2e-27
Identities = 58/144 (40%), Positives = 89/144 (61%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR R RK EA++KGR
Sbjct: 15 LNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G GKR GTANARMPQK++W +I + + Y +AKG++FK+
Sbjct: 75 HMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKH 134
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQ 512
+ + + I ++KA++ R K L++Q
Sbjct: 135 RFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 122 bits (293), Expect = 1e-26
Identities = 60/144 (41%), Positives = 83/144 (57%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
++CGK++V +P I +SR+ IR +I+ ++ K + SR R+R A+R GR
Sbjct: 15 LKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G GKRRGT ARMP K LW +KIDRHLY +LY KAKGN+FKN
Sbjct: 75 HSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKN 134
Query: 441 KRVLMEYIHRKKAEKARTKMLSDQ 512
KRVL+E+I + E+ K ++
Sbjct: 135 KRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 118 bits (284), Expect = 1e-25
Identities = 53/137 (38%), Positives = 81/137 (59%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR R R E ++KGR
Sbjct: 15 LKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGR 74
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
H G G R+G ARM +KELW KKIDR Y LY++AKG FK+
Sbjct: 75 HRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKS 134
Query: 441 KRVLMEYIHRKKAEKAR 491
K L ++ K R
Sbjct: 135 KHQLYMFLEEHNLLKKR 151
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 104 bits (249), Expect = 2e-21
Identities = 52/145 (35%), Positives = 78/145 (53%)
Frame = +3
Query: 51 SCRRGLQPLXMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 230
S +R + ++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV+
Sbjct: 7 SVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVK 66
Query: 231 KNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLY 410
K E R+KGR G G RRG A AR P KE W + KIDR +Y LY
Sbjct: 67 KLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLY 126
Query: 411 MKAKGNVFKNKRVLMEYIHRKKAEK 485
AKG F+++ L Y+ + K
Sbjct: 127 RMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 68.1 bits (159), Expect(2) = 7e-21
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
+RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K T ARR+G
Sbjct: 49 LRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGW 97
Query: 261 HCGFGKRRGT 290
H G KR+GT
Sbjct: 98 HMGIRKRKGT 107
Score = 55.2 bits (127), Expect(2) = 7e-21
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 381 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 512
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 99 bits (238), Expect = 4e-20
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +3
Query: 180 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 359
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 360 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 512
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 97.1 bits (231), Expect = 3e-19
Identities = 48/141 (34%), Positives = 74/141 (52%)
Frame = +3
Query: 51 SCRRGLQPLXMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 230
S +R + ++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R
Sbjct: 4 STQRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAR 63
Query: 231 KNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLY 410
+ E ++KGR G G R+G AR K W K ID Y LY
Sbjct: 64 ELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLY 123
Query: 411 MKAKGNVFKNKRVLMEYIHRK 473
K KGN+FK++ L+ Y+ +K
Sbjct: 124 KKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/117 (29%), Positives = 62/117 (52%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 269
G +VW+DP +++++++ ++++R++I +G++ +P SR+R RK + KGR G
Sbjct: 23 GVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSG 82
Query: 270 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
G R+G+ANAR P+K W I Y Y KAKG +++
Sbjct: 83 QGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/128 (32%), Positives = 62/128 (48%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K E KGR
Sbjct: 14 MKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGR 73
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 440
G G RGT AR P+K W T KID+ Y Y K F +
Sbjct: 74 RRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVS 133
Query: 441 KRVLMEYI 464
+ L +I
Sbjct: 134 RAQLRNHI 141
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 70.1 bits (164), Expect = 4e-11
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +3
Query: 75 LXMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 233
+ ++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 23 IILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 57 RRGLQPLXMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 230
+R L + G+ ++W+ DP EI ++ ++R +IK G++ P ++ +
Sbjct: 6 QRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASK 65
Query: 231 KNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLY 410
RRKGR G G+R+G A AR+ KE W + IDR Y LY
Sbjct: 66 VRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLY 125
Query: 411 MKAKGNVFKNKRVLMEYI 464
M AKG F++ L Y+
Sbjct: 126 MLAKGGTFRDLASLKRYM 143
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 69.3 bits (162), Expect = 7e-11
Identities = 35/125 (28%), Positives = 57/125 (45%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 269
GK ++W DP+E EIA +R++IR+++ G++ + +S+ R R E R G G
Sbjct: 18 GKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSKGRARSRAEKRAYGHRKG 77
Query: 270 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 449
G R+G + R +K+ W + Y +Y KA G F++
Sbjct: 78 PGSRKGRSGGRKNEKDEWVSRIRAQRRRLRELRDDGPLTPTQYREVYNKASGGEFEDVAR 137
Query: 450 LMEYI 464
L YI
Sbjct: 138 LEAYI 142
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 65.3 bits (152), Expect = 1e-09
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = -2
Query: 578 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 399
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 398 V*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 261
+ +P++L +V +Q + + L+L P L HT + T++LT V
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/138 (26%), Positives = 61/138 (44%)
Frame = +3
Query: 51 SCRRGLQPLXMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 230
S ++ L + G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR R R
Sbjct: 5 SAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRAR 64
Query: 231 KNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLY 410
+ G G G R+G A AR +K + + Y +Y
Sbjct: 65 ERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMY 124
Query: 411 MKAKGNVFKNKRVLMEYI 464
A G F + R L Y+
Sbjct: 125 NMANGGEFDSVRRLTNYV 142
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 62.9 bits (146), Expect = 6e-09
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +3
Query: 93 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGF 272
K ++ + + ++ +R ++R ++K+GL+ KP +SR R R E R+ GR G
Sbjct: 15 KSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGR 74
Query: 273 GKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 449
G RRGT AR KE+W ID+ + +LY AKG F++
Sbjct: 75 GSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAH 134
Query: 450 LMEYI 464
L Y+
Sbjct: 135 LRTYM 139
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = -2
Query: 488 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 309
G+ LL + +L E + L + V+ V+ V LL V E+ NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 308 WHTRIGSTSSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDL 129
+ +GST L A + L + VF+ G+D ++ LDD+ I D ++D+L GVG+ D
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDF 162
Query: 128 I 126
I
Sbjct: 163 I 163
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = +3
Query: 81 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 260
++CG K+ ++P + + + N+R+ I + K ++IKK + S R + ++ G
Sbjct: 14 LKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSGL 73
Query: 261 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH--LYHSLYM--KAKGN 428
G G+R+GT NAR K LW K+ + L + ++ K KGN
Sbjct: 74 KRGIGRRKGTKNARKKYKILWIHKIRNQRKLLKMFRNKKQFLNYKILLNKVFFFSKIKGN 133
Query: 429 VFKNKRVLMEYI 464
F + + L+E++
Sbjct: 134 FFSSTKHLLEHM 145
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHSRARVRKNTEARR-KGRH 263
G ++ + + I ++ ++ +R IR +IKDG +++ K V + S R+++ + R K
Sbjct: 18 GINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEG 76
Query: 264 CGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 437
G R+G AR K++W K IDRH Y LY+K KG +K
Sbjct: 77 KKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/132 (25%), Positives = 56/132 (42%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 269
G ++ + P + ++ ++R +I GL+ +P SR R R ++KGR G
Sbjct: 15 GVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRG 74
Query: 270 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 449
G R+G R ++E W K++ ++ LY KGN F++
Sbjct: 75 HGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFRDLDH 131
Query: 450 LMEYIHRKKAEK 485
L YI+ K K
Sbjct: 132 LKTYINEHKLAK 143
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 56.0 bits (129), Expect = 7e-07
Identities = 34/133 (25%), Positives = 62/133 (46%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 269
G +++ DP +++IA+ +R +IR +I + KPV+ SR R + + K R
Sbjct: 19 GIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGRAQHKRRQKAK-RGSK 77
Query: 270 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 449
G ++G AR+ +K+++ K I + +LY K GN +NK
Sbjct: 78 AGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDRKDITNPEFWALYKKVGGNTVRNKAH 137
Query: 450 LMEYIHRKKAEKA 488
L + KA+++
Sbjct: 138 LHLLVDEIKAKRS 150
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 201 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 380
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 381 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 485
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -3
Query: 523 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 347
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 346 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 206
R L L +F GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 369 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 512
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +1
Query: 409 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 588
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 589 CCRPSLEKTKP 621
R S + +P
Sbjct: 61 SSRLSPRRKRP 71
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 49.6 bits (113), Expect = 6e-05
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 269
G ++ D + + ++A+ +R+NIR +I + SR R + +A+R R
Sbjct: 19 GVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGRAQTK-KAQRNKRGTK 77
Query: 270 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK-- 443
G ++G AR+ +KE++ K++ + +LY K GN +NK
Sbjct: 78 QGSKQGRKGARVGKKEIYVAKVRSLRRLLKIAKDRKELTNPEFWALYKKVGGNTVRNKAH 137
Query: 444 -RVLMEYIHRKK 476
R LME I K+
Sbjct: 138 LRQLMEEIVAKR 149
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2
Query: 200 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 84
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 43.2 bits (97), Expect = 0.005
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 90 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 197
G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 16 GAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 208 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 89
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 411 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 512
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 530 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 411
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 7.5
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 236 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 117
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 7.5
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -2
Query: 584 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 426
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 620 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 477
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 10.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 96 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 203
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 32.3 bits (70), Expect = 10.0
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 185 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EK 283
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,866,094
Number of Sequences: 1657284
Number of extensions: 13184649
Number of successful extensions: 37537
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 36208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37503
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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