Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_A24
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0469 + 3638493-3641166,3641286-3641653                           31   0.80 
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349...    30   1.9  
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458...    29   3.2  
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238...    28   5.6  
04_03_0258 - 13573730-13573816,13573881-13574666,13575043-135751...    28   7.5  
03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158,853...    28   7.5  

>11_01_0469 + 3638493-3641166,3641286-3641653
          Length = 1013

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 618 CVHDVFAFQLPSGFALLPCQQSPGYIQKNQLCYSFPLILIS 496
           CV++     +P+ FA LP  Q+  Y+  NQL  SFP +L++
Sbjct: 197 CVYNHIEGNIPNEFAKLPNLQTL-YVGSNQLSGSFPQVLLN 236


>10_08_0289 +
           16534063-16534100,16534219-16534243,16534847-16534978,
           16535255-16535441,16536014-16536189,16536282-16536377,
           16536511-16536615,16536654-16536683,16536698-16536784,
           16536874-16536963,16537033-16537113,16537200-16537268,
           16537413-16537490,16537578-16537673,16537981-16538080,
           16538208-16538311,16538396-16538501,16538595-16538673,
           16538861-16538963
          Length = 593

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 241 VLTHRIVNEGGQDQEVVIGARNLQRGSAVVAEIVTLNETEAENGIAVGKEIVVVSEIGT- 417
           VLT  I  EG +     + A +L+RG ++  + V  N       I+  +EI  V  I   
Sbjct: 134 VLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISAN 193

Query: 418 -EKVIKEMI-KEMDLV 459
            E+ I E+I K M+ V
Sbjct: 194 GEREIGELIAKAMEKV 209


>09_06_0067 -
           20645012-20645095,20645365-20645466,20645583-20645828,
           20646042-20646236,20646343-20646636,20646952-20647134,
           20647534-20647593,20647796-20648002,20648081-20648282,
           20648367-20648494,20648759-20648842,20648955-20649134,
           20649281-20649372,20649620-20649789,20650226-20650337,
           20650451-20650554,20651262-20651371
          Length = 850

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 295 GARNLQRGSAVVAEIVTLNETEAENGIAVGKEI 393
           G RNL+R  A +A    +   E ++ + +GKEI
Sbjct: 559 GVRNLERNLAALARAAAVKVAEQDSALRLGKEI 591


>03_01_0305 -
           2383187-2383298,2383606-2383684,2383762-2383867,
           2383941-2384044,2384141-2384240,2384533-2384628,
           2384724-2384801,2385355-2385423,2385511-2385591,
           2385670-2385759,2385859-2385945,2386022-2386126,
           2386591-2386686,2386796-2386971,2387225-2387384,
           2387898-2388029,2388236-2388260,2389023-2389174
          Length = 615

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 241 VLTHRIVNEGGQDQEVVIGARNLQRGSAVVAEIVTLNETEAENGIAVGKEIVVVSEIGT- 417
           VLT  I  EG +     + A +L+RG ++  + V  N       I+  +EI  V  I   
Sbjct: 163 VLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVVTNLKGMARMISTSEEIAQVGTISAN 222

Query: 418 -EKVIKEMI-KEMDLV 459
            E+ I E+I K M+ V
Sbjct: 223 GEREIGELIAKAMEKV 238


>04_03_0258 -
           13573730-13573816,13573881-13574666,13575043-13575126,
           13575254-13575322,13575324-13576228,13576517-13576784
          Length = 732

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 615 VHDVFAFQLPSGFALLPCQQSPGYIQKNQLCYSFPLILISP 493
           V DV   + P   A   C +S GY+Q +     F LIL+ P
Sbjct: 376 VSDVIK-KYPDDCAFPTCAESTGYVQVDNASVLFRLILVQP 415


>03_02_0442 +
           8529235-8529620,8529721-8529888,8529993-8530158,
           8530579-8530689,8530845-8530993,8531087-8531217,
           8531322-8531421,8532060-8532366
          Length = 505

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 172 CFKKWLGVGETVIGKGIDVDLEVVLTHRIVNEG 270
           C   WLGVGE  +G G +    V L  R+  +G
Sbjct: 9   CRHGWLGVGEAAVGGGGEEPFYVPLRKRLSVDG 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,854,636
Number of Sequences: 37544
Number of extensions: 209192
Number of successful extensions: 498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)