Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_A22
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79600-2|CAB01875.1| 226|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical pr... 33 0.13
EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha 1,2-fuc... 33 0.13
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 32 0.41
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 29 2.9
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 29 2.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.0
Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z79600-2|CAB01875.1| 226|Caenorhabditis elegans Hypothetical
protein F59C6.4 protein.
Length = 226
Score = 130 bits (313), Expect = 1e-30
Identities = 59/160 (36%), Positives = 93/160 (58%)
Frame = +3
Query: 171 LLGPGLRKEINGVFITKPGVLRKRTPNTYWVDNYQKRYVPSRGENVIGTVVQKAGDIFRV 350
++G G+ T+PG W++ + KRY+P G+ VI V K GD FR+
Sbjct: 20 IIGYGISVRGQTRIATQPGAFHN-DDGKVWLNVHSKRYIPQEGDRVIAIVTSKTGDFFRL 78
Query: 351 DVGGSCAASLSYLSFEGATKKNRPAIKTGDVVYAKMLNASKDMEPELVCVDSHGKKGRLG 530
D+G + A +++ +FEGATK+NRP +KTGD++YA + + + E EL CVD + +G
Sbjct: 79 DIGTAEYAMINFTNFEGATKRNRPNLKTGDIIYATVFDTTPRTEAELTCVDDEKRARGMG 138
Query: 531 VLEEGFVFXCSLNLIRKILNPHCPLLNSLKNEWPFELAAG 650
L GF+F SLN R+++NP C +L ++ + FE+ G
Sbjct: 139 QLNGGFMFKVSLNHCRRLINPSCKILQTVGKFFKFEITVG 178
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 454 FAYTTSPVLIAGRFFFVAPSNDRYDSDAAQLPPTSTRKISPAFCTTVPITFSPL 293
FAYT +A F P N+ YD Q+ P+ T ++P + + FS L
Sbjct: 281 FAYTVFEDRVAHFTFLQKPVNNSYDYSLPQISPSYTAILTPTLTPEIDLAFSRL 334
>Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical
protein F08A8.5a protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 454 FAYTTSPVLIAGRFFFVAPSNDRYDSDAAQLPPTSTRKISPAFCTTVPITFSPL 293
FAYT +A F P N+ YD Q+ P+ T ++P + + FS L
Sbjct: 262 FAYTVFEDRVAHFTFLQKPVNNSYDYSLPQISPSYTAILTPTLTPEIDLAFSRL 315
>EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha
1,2-fucosyltransferase protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 454 FAYTTSPVLIAGRFFFVAPSNDRYDSDAAQLPPTSTRKISPAFCTTVPITFSPL 293
FAYT +A F P N+ YD Q+ P+ T ++P + + FS L
Sbjct: 262 FAYTVFEDRVAHFTFLQKPVNNSYDYSLPQISPSYTAILTPTLTPEIDLAFSRL 315
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.41
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -3
Query: 607 NNGQCGFNIFLIKFKEHXNTNPSSNTPSR-PFFPCESTHTSSGSISLLAFNIFAYTTSPV 431
+NG GF + + P +P R P F T+S +SLL N + T+S
Sbjct: 238 SNGSGGFTL-PSSYASSALPTPLRESPERKPSFQ----DTTSTPLSLLTLN-GSPTSSES 291
Query: 430 LIAGRFFFVAPSNDRYDSDAAQ---LPPTSTRKISPAFCTTVPITFSPL 293
L + R F P+ ++ + LPP S SP+ T P+T +P+
Sbjct: 292 LASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPI 340
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.41
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -3
Query: 607 NNGQCGFNIFLIKFKEHXNTNPSSNTPSR-PFFPCESTHTSSGSISLLAFNIFAYTTSPV 431
+NG GF + + P +P R P F T+S +SLL N + T+S
Sbjct: 240 SNGSGGFTL-PSSYASSALPTPLRESPERKPSFQ----DTTSTPLSLLTLN-GSPTSSES 293
Query: 430 LIAGRFFFVAPSNDRYDSDAAQ---LPPTSTRKISPAFCTTVPITFSPL 293
L + R F P+ ++ + LPP S SP+ T P+T +P+
Sbjct: 294 LASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPI 342
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 31.9 bits (69), Expect = 0.41
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -3
Query: 607 NNGQCGFNIFLIKFKEHXNTNPSSNTPSR-PFFPCESTHTSSGSISLLAFNIFAYTTSPV 431
+NG GF + + P +P R P F T+S +SLL N + T+S
Sbjct: 238 SNGSGGFTL-PSSYASSALPTPLRESPERKPSFQ----DTTSTPLSLLTLN-GSPTSSES 291
Query: 430 LIAGRFFFVAPSNDRYDSDAAQ---LPPTSTRKISPAFCTTVPITFSPL 293
L + R F P+ ++ + LPP S SP+ T P+T +P+
Sbjct: 292 LASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPI 340
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 255 YWVDNYQKRYVPSRGENVIGTVVQKAGDIFRVDVGGSCAASLSYLSFE 398
+W DN K P + G +Q G +F V + G A S+ L+FE
Sbjct: 406 WWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAG-IALSIVTLAFE 452
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 255 YWVDNYQKRYVPSRGENVIGTVVQKAGDIFRVDVGGSCAASLSYLSFE 398
+W DN K P + G +Q G +F V + G A S+ L+FE
Sbjct: 390 WWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAG-IALSIVTLAFE 436
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Frame = +3
Query: 351 DVGGSCAASLSYLSFEGATKK--NRPAIKTGDVVYAKMLNASKDMEPELVCVDSHGKKGR 524
D GG CA L G + K N P + + L EPE C+DS R
Sbjct: 1391 DEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLVNKTKCEPENECLDSSSCSQR 1450
Query: 525 LGVLEEGFVFXCSLNLIRKILNPHCPLLNSLKN 623
+ GF C + C + +++K+
Sbjct: 1451 CKDEKHGFTCSCDEGYELDVDKRTCKVADNVKD 1483
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Frame = +3
Query: 351 DVGGSCAASLSYLSFEGATKK--NRPAIKTGDVVYAKMLNASKDMEPELVCVDSHGKKGR 524
D GG CA L G + K N P + + L EPE C+DS R
Sbjct: 1391 DEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLVNKTKCEPENECLDSSSCSQR 1450
Query: 525 LGVLEEGFVFXCSLNLIRKILNPHCPLLNSLKN 623
+ GF C + C + +++K+
Sbjct: 1451 CKDEKHGFTCSCDEGYELDVDKRTCKVADNVKD 1483
>Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical
protein F36G9.8 protein.
Length = 342
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 550 TNPSSNTPSRPFFPCESTHTSSGSISLLAFN 458
T P+S T C STHT G++S+L FN
Sbjct: 272 TIPNSQTSYFISLLCMSTHTFLGTLSMLYFN 302
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 249 NTYWVDNYQKRYVPSRGENVIGTVVQKAGDIFRVDVGGSCAASLSYLSFEGATKKN 416
N +DNY R P+R + V Q D+ RVD+ S + + AT+++
Sbjct: 48 NCQTLDNYVSREPPARRQAARMRVDQLRADVHRVDMAVSAVHTRMTQRWRAATERD 103
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 643 ANSNGHSFFNEFNNGQCGFNIFLIKFKE 560
A+ + + F +F NG+ IFL +FK+
Sbjct: 129 ADDDAEALFTQFENGEISVEIFLKQFKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,320
Number of Sequences: 27780
Number of extensions: 364582
Number of successful extensions: 1050
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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