Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_A22
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.48 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.48 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 255 YWVDNYQK--RYVPSRGENVIGTVVQKAGDIFRVDVGG 362
           Y VD+Y    +    +G NV+G +VQ  GD   V + G
Sbjct: 341 YVVDSYGNHVKLYTKQGLNVLGNIVQGNGDSVNVQLYG 378


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 255 YWVDNYQK--RYVPSRGENVIGTVVQKAGDIFRVDVGG 362
           Y VD+Y    +    +G NV+G +VQ  GD   V + G
Sbjct: 341 YVVDSYGNHVKLYTKQGLNVLGNIVQGNGDSVNVQLYG 378


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 265 STQYVFGVRFRNTPGFVIKTPLISLRSP 182
           ST Y   VR + T G+   TP++  ++P
Sbjct: 488 STDYAIQVRAKTTRGWGEYTPVVYKKTP 515


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 175 SRTFPFSPAATI 140
           SRT+PF P+ T+
Sbjct: 281 SRTWPFRPSGTV 292


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 153 GEKGKVLLGPGLR 191
           G+K K+L+GP +R
Sbjct: 184 GQKHKLLIGPSIR 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,414
Number of Sequences: 438
Number of extensions: 4874
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)