Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_A20
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285...    29   2.2  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    29   2.2  

>08_01_0319 +
           2848751-2848762,2849516-2850449,2850476-2851234,
           2851793-2851850,2851900-2852179
          Length = 680

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 560 GPSFSTISRALLMYALHLLIVYKKITGNPFPKCTNIFTTSF 438
           GPSF  +SRA+  Y +HLL    ++        +N+FTT++
Sbjct: 350 GPSFRVMSRAISNYIMHLLFANPEML--MAGSRSNLFTTAY 388


>02_01_0369 +
           2649178-2655291,2655773-2656601,2656737-2657425,
           2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  SSKCGDRICEIKRFVKKMRKRKIEISSCKKGI 114
           S++C D  CE++   + M +  +E++SC+  +
Sbjct: 553 SNRCADLECELRSTKENMERTLVELASCRNSL 584


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,639
Number of Sequences: 37544
Number of extensions: 275323
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)