Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_A19
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 93 3e-20
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 90 3e-19
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 83 3e-17
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 83 4e-17
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 78 1e-15
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 64 2e-11
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 58 8e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 30 0.34
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 28 1.0
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 3.1
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 3.1
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 3.1
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 26 5.5
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 25 7.2
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 7.2
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 25 9.5
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 9.5
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 25 9.5
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.5
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 25 9.5
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 9.5
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 9.5
SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|c... 25 9.5
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 93.1 bits (221), Expect = 3e-20
Identities = 35/79 (44%), Positives = 59/79 (74%)
Frame = +3
Query: 408 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 587
+TV+++ + E+EE+ LRLTV+DTPG+GD I+N+ C+ S++++I++Q E ++R +
Sbjct: 69 KTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQDQQP 128
Query: 588 NRRNIVDNRIHCCFYFISP 644
+RR I+D RIH C YF+ P
Sbjct: 129 DRRKIIDMRIHACLYFLRP 147
Score = 58.0 bits (134), Expect = 1e-09
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 209 NLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDL 364
N E +VG A+LPNQ H+ + G FTLM+ GESGLGK+T N+LF T +
Sbjct: 2 NEEETNFVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTI 53
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 89.8 bits (213), Expect = 3e-19
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Frame = +3
Query: 333 LWSTLCS*PIYTLNE*SLYATEKTNQ--TVKLDASTVEIEERGVKLRLTVVDTPGYGDAI 506
L +TL + +Y + SL N TV +++S VEI E G+ L+L V+DTPG+GD I
Sbjct: 111 LVNTLLNRDVYPPTQKSLTGDFGVNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFI 170
Query: 507 DNTDCFRSIIQYIDEQFERFLRDESGLNRRNIVDNRIHCCFYFISPFGH 653
DNTDC++ ++ I+ +++++L E R I D R+H C +FI P GH
Sbjct: 171 DNTDCWQPVLTDIEGRYDQYLELEKHNPRSTIQDPRVHACIFFIQPTGH 219
Score = 74.5 bits (175), Expect = 1e-14
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +2
Query: 224 GYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYP 370
GYVGFA+LPNQ HR+ V++GF F ++V+GESG GKSTLVN+L D+YP
Sbjct: 74 GYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYP 122
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 83.0 bits (196), Expect = 3e-17
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 408 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 587
QT ++ ++ + E V+L+L ++DTPGYGD I+N C+ II+YI +Q +LR E
Sbjct: 72 QTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRELNS 131
Query: 588 NR-RNIVDNRIHCCFYFISPFGH 653
+R + + D R+HCC +FI P GH
Sbjct: 132 HREKRLQDTRVHCCLFFIRPTGH 154
Score = 60.5 bits (140), Expect = 2e-10
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +2
Query: 227 YVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDL 364
YVGF ++ +Q++RK +++GF+F +MVVG SG GKSTL+N+LF L
Sbjct: 12 YVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHL 57
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 82.6 bits (195), Expect = 4e-17
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +3
Query: 306 SGKVDWANLLWSTLCS*PIYTLNE*SLYATEK---TNQTVKLDASTVEIEERGVKLRLTV 476
+GK + N L++T +L Y T K +T+++ + IEE G + LTV
Sbjct: 41 TGKTTFFNTLFAT-------SLQPEKSYETAKETIAKKTLEVKKNKAVIEEDGFHINLTV 93
Query: 477 VDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRNIVDNRIHCCFYFISP 644
+DTPG+GD IDNT C+ ++ +Y+DEQ ER+L + R D R+H C YFI+P
Sbjct: 94 LDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRKDTRVHVCLYFITP 149
Score = 38.7 bits (86), Expect = 7e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 242 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPER 376
+LP++ +K T+M+ G SG GK+T N+LF T L PE+
Sbjct: 15 SLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEK 59
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 77.8 bits (183), Expect = 1e-15
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 339 STLCS*PIYTLNE*SLYATEKTNQTVKL-DASTVEIEERGVKLRLTVVDTPGYGDAIDNT 515
+TLC P+ N A + V++ T I E G K+ LTV+DTP +G+AIDN
Sbjct: 70 NTLCEKPLIRHNNNFDPAEASSVSPVEIVPYQTDIILEDGTKINLTVLDTPHFGEAIDNE 129
Query: 516 DCFRSIIQYIDEQFERFLRDESGLNRR-NIVDNRIHCCFYFISPFGH 653
+ F I+QYI+ Q++ L +ES + R D+R+H YFISP GH
Sbjct: 130 NNFDIILQYIESQYDNVLEEESRIKRNARFCDDRVHALIYFISPTGH 176
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 152 EYNIKKLLKMSNETNKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKS 331
++ + +LL + + T T G + L + +KS KKG LMVVG+ GLG++
Sbjct: 8 DFGVVQLLFLHSNDTLTARTHITKGQIDI-ELTMRTTKKSSKKGIPLNLMVVGDVGLGRT 66
Query: 332 TLVNSL 349
+N+L
Sbjct: 67 AFINTL 72
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 64.1 bits (149), Expect = 2e-11
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 459 KLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRR-NIVDNRIHCCFYF 635
K LT+VDTPG+GD DN++C+R I + + + ++E ++R + +D+RIH C +F
Sbjct: 167 KFNLTIVDTPGFGDKSDNSNCWRPIATNLLHRLNAYFQNEVKMDRETSEIDSRIHGCLFF 226
Query: 636 ISPFGH 653
I+P GH
Sbjct: 227 INPNGH 232
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 176 KMSNETNKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNS 346
++ N K+ +G + +Q + + + G + L+VVGES LGK+T VNS
Sbjct: 81 EVPNSNGKSIPTFHPCNNIGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNS 137
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 58.4 bits (135), Expect = 8e-10
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 438 EIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRN-IVDNR 614
+I E + LTV++ G+GD IDN+ F + Y++ QF++ L +ES + R + D R
Sbjct: 69 DILEDEFHVDLTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKRNSKFTDTR 128
Query: 615 IHCCFYFISPFGH 653
+ YFI+P GH
Sbjct: 129 VDALLYFIAPRGH 141
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 296 LMVVGESGLGKSTLVNSLFLTDLYPERVIPVCY 394
L+VVG+ G GK+ L+ +F + +PER +P +
Sbjct: 17 LVVVGDGGCGKTCLL-IVFSSGTFPERYVPTVF 48
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 290 FTLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
F L+++G+SG+GKS L+ F D Y E I
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFADDTYTESYI 38
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 324 ANLLWSTLCS*PIYTLNE*SLYATEKTNQTVKLDASTVEI 443
A L+++L + T+N+ +Y+ +K+NQT K ++I
Sbjct: 419 AKFLYASLFDWLVATINKALMYSADKSNQTAKSFIGVLDI 458
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 242 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLF 352
NLP ++ SV + + +VG +G GKSTL +LF
Sbjct: 1236 NLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALF 1272
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 287 EFTLMVVGESGLGKSTLVNSLFLTDLYPE 373
E+ L+VVG+ G+GKS L L + E
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDE 36
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 644 R*YEVETAMNAIVHNVTTV 588
R Y VE A NAIVH V++V
Sbjct: 1574 RIYGVEAARNAIVHEVSSV 1592
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 275 KKGFEFTLMVVGESGLGKSTLVN 343
KK ++++GESG+GK++++N
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMN 26
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/59 (20%), Positives = 28/59 (47%)
Frame = -2
Query: 478 TTVKRSFTPRSSISTVDASNFTVWFVFSVAYRDYSFRV*IGQEQRVDQSRFAQSTFPDH 302
TT++ P +I D+ N + + ++ Y+F++ + +E ++ S P+H
Sbjct: 673 TTLRNLIYPYDTIELEDSWNSSWGCIPNIELDPYAFKLYVPEEDFIENDPIITSLTPEH 731
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 302 VVGESGLGKSTLVNSLF 352
+VG +G GKSTL +LF
Sbjct: 1258 IVGRTGAGKSTLAMALF 1274
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 NLPNQVHRK-SVKKGFEFTLMVVGESGLGKSTLVN 343
NL + ++R S + + +VG++G GKSTL+N
Sbjct: 400 NLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLN 434
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 275 KKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPVC 391
KKG +M+VG G GK+T + L L Y R + C
Sbjct: 97 KKGRPSVIMMVGLQGSGKTTTCSKLALH--YQRRGLKSC 133
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 302 VVGESGLGKSTLVNSL 349
++GESG GK+TL+N L
Sbjct: 916 LMGESGAGKTTLLNVL 931
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 287 EFTLMVVGESGLGKSTLVNSL 349
+FTL VVG +G GKSTL +L
Sbjct: 608 QFTL-VVGSTGSGKSTLAMAL 627
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/28 (28%), Positives = 21/28 (75%)
Frame = +2
Query: 299 MVVGESGLGKSTLVNSLFLTDLYPERVI 382
+++G +G GKST+V+++ + +P +++
Sbjct: 37 LIIGPNGTGKSTIVSAICIGLGWPPKLL 64
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 555 FERFLRDESGLNRRNIVDNRIHCCF----YFISP 644
F++ L+D G R +I+DN C FISP
Sbjct: 1188 FQKLLKDAKGQLRIHIIDNMSRICLRETSLFISP 1221
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 333 VDLPSPLSPTTIRVNSKPFFTDF 265
+ +P PL+P+ +N +PF F
Sbjct: 188 MSVPPPLTPSASTINDQPFSNSF 210
>SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +3
Query: 84 FKLNLNIPNHCLFSHRNYRKFKLNIILKNC 173
+ +N + N +F H ++R F+L ++ C
Sbjct: 29 YNMNPELENPGMFKHVDWRDFRLEFVILAC 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,423,112
Number of Sequences: 5004
Number of extensions: 46773
Number of successful extensions: 234
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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