Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_A19
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 75 6e-14
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 75 6e-14
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 75 6e-14
AL132902-3|CAC14419.1| 271|Caenorhabditis elegans Hypothetical ... 32 0.31
AL132902-2|CAB81987.1| 271|Caenorhabditis elegans Hypothetical ... 32 0.31
U40411-2|AAR25660.2| 413|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 29 3.8
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 28 5.0
U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical p... 28 5.0
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 28 5.0
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 6.7
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 6.7
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 28 6.7
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 6.7
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 6.7
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 6.7
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 28 6.7
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 28 6.7
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 28 6.7
AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p... 27 8.8
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +3
Query: 339 STLCS*PIYTLNE*SLYATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTD 518
+TL I LNE T TV+++ V++ E V L LT+VDTPG+GDA++N+
Sbjct: 65 NTLFLAEINNLNEKESAPTHPHPSTVRVEEKLVKLVENSVSLNLTLVDTPGFGDAVNNSK 124
Query: 519 CFRSIIQYIDEQFERFLRDESGLNR-RNIVDNRIHCCFYFISPFGH 653
C+ I+ Y++ +F +E+ ++R IVD +H C YFI P GH
Sbjct: 125 CWEPIVNYVESKFFEQFCEETRIDRGEKIVDKCVHLCLYFIEPSGH 170
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = +2
Query: 182 SNETNKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTD 361
++E+ +T + E P Y GFAN PNQV R++VK GF+FTLMVVG SGLGKST +N+LFL +
Sbjct: 12 NDESLRTGQHKENPNYWGFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAE 71
Query: 362 L 364
+
Sbjct: 72 I 72
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 408 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 587
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 134 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 193
Query: 588 NR--RNIVDNRIHCCFYFISPFGH 653
R + D+RIH C YFISP GH
Sbjct: 194 RRMLQYFNDSRIHACLYFISPTGH 217
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +2
Query: 212 LETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLF 352
++ G+VGF +LP+Q+ +K+V+ GF+F LM VGE+G GK+TL+ SLF
Sbjct: 74 MQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 120
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 408 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 587
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 134 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 193
Query: 588 NR--RNIVDNRIHCCFYFISPFGH 653
R + D+RIH C YFISP GH
Sbjct: 194 RRMLQYFNDSRIHACLYFISPTGH 217
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +2
Query: 212 LETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLF 352
++ G+VGF +LP+Q+ +K+V+ GF+F LM VGE+G GK+TL+ SLF
Sbjct: 74 MQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 120
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 408 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 587
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 203 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 262
Query: 588 NR--RNIVDNRIHCCFYFISPFGH 653
R + D+RIH C YFISP GH
Sbjct: 263 RRMLQYFNDSRIHACLYFISPTGH 286
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +2
Query: 212 LETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLF 352
++ G+VGF +LP+Q+ +K+V+ GF+F LM VGE+G GK+TL+ SLF
Sbjct: 143 MQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 189
>AL132902-3|CAC14419.1| 271|Caenorhabditis elegans Hypothetical
protein Y71A12B.3 protein.
Length = 271
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 96 LNIPNHCLFSHRNYRKFKLNIILKNC*KCQMKQI 197
L++P F R+Y F+ N+I +NC C+ + I
Sbjct: 83 LSLPKAATFESRSYEYFRTNLIRRNCETCKSRTI 116
>AL132902-2|CAB81987.1| 271|Caenorhabditis elegans Hypothetical
protein Y71A12B.2 protein.
Length = 271
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 96 LNIPNHCLFSHRNYRKFKLNIILKNC*KCQMKQI 197
L++P F R+Y F+ N+I +NC C+ + I
Sbjct: 83 LSLPKAATFESRSYEYFRTNLIRRNCETCKSRTI 116
>U40411-2|AAR25660.2| 413|Caenorhabditis elegans Hypothetical
protein B0403.5 protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 390 HTGITRSGYKSVKNKELTRVDLPSPLSPTTIRVNSKPFFTDFLCT 256
H G V+ +TR+ S SPTT ++ PFF L T
Sbjct: 323 HAGGPTDTKDGVQPASVTRISFASTASPTTYSTSTTPFFRPVLTT 367
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resistance
protein familyprotein 6 protein.
Length = 1396
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = +2
Query: 218 TPGYVGFANLPNQVHRKSVKKGFEFTLM------VVGESGLGKSTLVNSLF 352
T G + F N+ V K F ++ VVG +G GKSTL+ +F
Sbjct: 1132 TKGEIEFENVSVNYGETKVLKNLSFVVLGGQKIGVVGRTGAGKSTLIKIIF 1182
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 290 FTLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
F L+++G+SG+GKS L+ F D Y E I
Sbjct: 12 FKLLLIGDSGVGKSCLL-LRFADDTYTESYI 41
>U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical
protein C37C3.3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 444 EERGVKLRLT-VVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRD 575
E+R V + + PG+ +AID D R ++ E ++ L D
Sbjct: 183 EQREVAKEIADAISNPGFNNAIDEADLLRELVDLEQEALDKDLLD 227
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 290 FTLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
F L+++G+SG+GKS L+ F D Y E I
Sbjct: 12 FKLLLIGDSGVGKSCLL-LRFADDTYTESYI 41
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLF 352
T+ +VG SG GKSTL+ LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 436 TVDASNFTVW----FVFSVAYRDYSFRV*IGQEQRVDQS 332
TV SNF F+F+ Y DYSFR+ RV Q+
Sbjct: 2224 TVQCSNFVTTTDSKFIFACGYPDYSFRIVDTDSGRVRQA 2262
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 436 TVDASNFTVW----FVFSVAYRDYSFRV*IGQEQRVDQS 332
TV SNF F+F+ Y DYSFR+ RV Q+
Sbjct: 2224 TVQCSNFVTTTDSKFIFACGYPDYSFRIVDTDSGRVRQA 2262
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 299 MVVGESGLGKSTLVNSLFLTDLY-PERVIPV 388
+++GESG+GKS+L+ F+ D+ PER + +
Sbjct: 1 LIIGESGVGKSSLM-LRFVDDVVDPERAVSI 30
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 296 LMVVGESGLGKSTLVNSLFLTDLYP 370
+ +VGE+G GK+TL+ L L DL P
Sbjct: 526 ICIVGENGAGKTTLL-KLLLDDLQP 549
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLF 352
T+ +VG SG GKSTL+ LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLF 352
T+ +VG SG GKSTL+ LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLF 352
T+ +VG SG GKSTL+ LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
TL++ G+SG+GK++L+ + D++P + I
Sbjct: 409 TLLITGDSGIGKTSLMR--VIADMWPHQGI 436
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
TL++ G+SG+GK++L+ + D++P + I
Sbjct: 437 TLLITGDSGIGKTSLMR--VIADMWPHQGI 464
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 293 TLMVVGESGLGKSTLVNSLFLTDLYPERVI 382
TL++ G+SG+GK++L+ + D++P + I
Sbjct: 409 TLLITGDSGIGKTSLMR--VIADMWPHQGI 436
>AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B3 protein.
Length = 499
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 194 NKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFL--TDLY 367
N T + ++ + N VH ++ G+E V S LG + N +F + Y
Sbjct: 361 NATIAEIQRHASILNVNFWRLVHEPTIVNGYEIDAGAVITSQLGALHVNNDIFKDPSKFY 420
Query: 368 PERVI 382
PER I
Sbjct: 421 PERFI 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,574
Number of Sequences: 27780
Number of extensions: 252599
Number of successful extensions: 946
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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