Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_A16
(530 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 0.33
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.33
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.33
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.43
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.7
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 2.3
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 2.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 3.0
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 3.0
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 26 4.0
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 5.3
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.3
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 5.3
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.0
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 7.0
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 7.0
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 25 7.0
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 7.0
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 7.0
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 7.0
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 25 9.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.3
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 25 9.3
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.5 bits (63), Expect = 0.33
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +2
Query: 311 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 466
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 467 AKKVSSNVQETNEKLAPKI 523
K + T +KL KI
Sbjct: 187 YKDMEQENASTIQKLTSKI 205
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 29.5 bits (63), Expect = 0.33
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 490
KA + LE+ ++ E + EE+ H + T+ + + + +QE ++ K +
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYR 412
Query: 491 QETNE 505
Q+ +E
Sbjct: 413 QKLSE 417
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.5 bits (63), Expect = 0.33
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 293 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQK 463
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ + S++
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 464 L 466
L
Sbjct: 112 L 112
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.43
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 490
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNL 185
Query: 491 QETNEKLAP 517
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 109 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAWM 231
D +F D++ H K FH E+ + + +K D K W+
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEWL 707
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 418
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 364 LGRALDVLPRLFQSLLGLAVRVSERXPGDSW 272
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 103 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 192
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 460
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEK 397
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 347 CSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSIQALLKSCAS 201
C +T+PKPP+ + L LP + A+ +D ++Q LKS S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKSTAQ-----FSDETFTVQPRLKSTHS 333
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 368 LRKAHPDVEKNATALREKLQAAVQNTVQE 454
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 5.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 82 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA 207
L + V R F + +EH+ K+LE+Q + L +SKDA
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDA 233
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 305 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 400
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 308 RSRLRALPWRLLAKAL-SCCSTDSEPSI 228
+S+ A W + +AL SCC +PSI
Sbjct: 106 KSQKSAAEWEEIERALLSCCKRSKDPSI 133
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 7.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +2
Query: 293 LGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 433
L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 525 LTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 7.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 420 FSRRAVAFFSTSGWALRSSSAVRSMF 343
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 341 ASTVPKPPWPCRSRLRALP 285
AST+ K PWP + L +P
Sbjct: 38 ASTLEKEPWPASTALLVMP 56
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 GDANGKAKEALEQSRQNIERTAEE 367
G NG+AKE E+ R ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 299 DANGKAKEALEQSRQNIERTAEE 367
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 7.0
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 332 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 484
++RQ E A+ +RK+ PDV + ++ +V + +E + +SS
Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSS 334
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 24.6 bits (51), Expect = 9.3
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 169 EQQFNSLTKSKDAQDFSKAWMDGSESVLQQ 258
++Q NS+T+ + D +K+W+ + L +
Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNK 113
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.6 bits (51), Expect = 9.3
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 505
++ Q+IE T L K D+E++ +++ + V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 506 KLA 514
L+
Sbjct: 554 VLS 556
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 24.6 bits (51), Expect = 9.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 73 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWMDGSESV 249
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA +G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 250 LQQL 261
Q+
Sbjct: 73 NNQI 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,558,737
Number of Sequences: 5004
Number of extensions: 25014
Number of successful extensions: 154
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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