Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_A13
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79752-3|CAB02078.2|  130|Caenorhabditis elegans Hypothetical pr...    70   2e-12

>Z79752-3|CAB02078.2|  130|Caenorhabditis elegans Hypothetical
           protein D2005.3 protein.
          Length = 130

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 36/82 (43%), Positives = 53/82 (64%)
 Frame = +1

Query: 274 ILSQALSQDARARLNTIKLGRPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQ 453
           ++SQ L Q A  RL+ + + +PEKA M+E  +  MA+ GQ+  K+T+  L  ++E  + Q
Sbjct: 47  MISQILDQAAMQRLSNLAVAKPEKAQMVEAALINMARRGQLSGKMTDDGLKALMERVSAQ 106

Query: 454 MPKSQSTVKFDRRRAALDSDDE 519
             K+ S VKFDRRR  LDSD+E
Sbjct: 107 TQKATS-VKFDRRRNELDSDEE 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,946,365
Number of Sequences: 27780
Number of extensions: 208705
Number of successful extensions: 437
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)