Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_P19
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 32 0.31
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 32 0.31
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 29 2.2
AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical ... 29 2.9
AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical ... 29 2.9
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 6.6
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 151 bits (366), Expect = 4e-37
Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Frame = +1
Query: 124 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 297
MAPP +ADLGK A D+F+KGY+FG K+D T++ VEF S + N SGK+ G+L
Sbjct: 1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60
Query: 298 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 477
K+ + YG+T TEKWNT+N L T I + ++ GLKVTL+ +AP G ++GK+K +
Sbjct: 61 VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWA 120
Query: 478 NDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQS 645
T V ++ + A PV++ A V + GWL G FD+ K + + A G+ +
Sbjct: 121 LPTARVTADVGVTSA-PVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHST 175
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 372
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 372
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 319 YGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND-TVAV 495
Y TFT W+T++T+ T QD + + T E T A + + T T + T +V
Sbjct: 460 YPSTFTSSWSTESTVLT-TQQQDTTTSVILETTEATDAASSSLSPDDVSTQLTTEATTSV 518
Query: 496 NTNLDLD 516
+++ D
Sbjct: 519 VSSVPPD 525
>AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1b protein.
Length = 255
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 375
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1a protein.
Length = 297
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 375
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 137 YGGAMSVFYKFTNWYYFTENSTQIGARDQSLHCPPQDNFDYVKQV 3
+G ++ V K +W + E Q+ RD L N D+V Q+
Sbjct: 1737 FGESLRVAIKLPSWLFAVELFEQLSFRDSKLELRFLKNVDFVGQI 1781
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 280 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 375
VFG LSS DYG+T K+ TD I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 137 YGGAMSVFYKFTNWYYFTENSTQIGARDQSLHCPPQDNFDYVKQV 3
+G ++ V K +W + E Q+ RD L N D+V Q+
Sbjct: 1737 FGESLRVAIKLPSWLFAVELFEQLSFRDSKLELRFLKNVDFVGQI 1781
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,234
Number of Sequences: 27780
Number of extensions: 305222
Number of successful extensions: 854
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -