Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_P15
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0294 - 16444565-16445137,16445999-16446256,16446609-164471...    44   8e-05
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281...    30   1.9  
10_07_0196 + 13978647-13979142,13979242-13980542                       29   2.5  
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512...    29   4.4  
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644...    28   7.7  

>09_04_0294 -
           16444565-16445137,16445999-16446256,16446609-16447106,
           16449641-16449676,16451057-16451269,16451971-16452060,
           16453627-16453851
          Length = 630

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +3

Query: 276 ADGLFDLLMMKLSQHYTSKKQTKIESKGPRFELGDFCVKLGSVTMN--QNFKGILIEVEY 449
           AD  F  +M KL  +   K +  +  +G +++LGDFC+++G    N  +  +GI++EVEY
Sbjct: 52  ADSAFPQVMEKLQSY---KARVTLNFEGFQYQLGDFCLRIGKCVPNNSETLRGIMMEVEY 108

Query: 450 RP 455
            P
Sbjct: 109 YP 110


>03_01_0360 +
           2815067-2816033,2816120-2816198,2816275-2816342,
           2817382-2817464,2821566-2823083
          Length = 904

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 213 ELCNICTVFVVPMSGCDK*LSQSTRNC 133
           E C+   V V P S CD+ +S S R+C
Sbjct: 527 ETCDRSVVLVTPKSSCDQMISSSDRSC 553


>10_07_0196 + 13978647-13979142,13979242-13980542
          Length = 598

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 225 AGCSELCNICTVFVVPMSGCDK*LSQSTRNCPCCVAPNAKIR 100
           A C +LC  CTV    +   D   S+S + C CC  P  K R
Sbjct: 98  AQCDDLCKRCTVATNDV--VDTRRSKSRQLCSCCSEPFTKAR 137


>07_03_0463 -
           18449908-18450171,18450718-18450810,18451170-18451254,
           18451607-18451705,18452099-18452238,18453036-18453482
          Length = 375

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 426 GILIEVEYRPCVMANAVWGLLREFLQG-LLGPTVPVQP 536
           GI+  +EY P  MA  + GL+R FL   +  P+ P  P
Sbjct: 298 GIMYFLEYEPDTMAPFLRGLIRRFLASKISNPSPPPNP 335


>04_01_0490 -
           6440176-6440448,6440785-6441074,6441156-6441304,
           6441432-6441890,6441973-6442269,6442604-6443502,
           6443793-6443827,6443984-6444078,6444184-6444247,
           6446099-6446175,6446330-6446514
          Length = 940

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = +3

Query: 510 LGPTVP--VQPPQHLISRMNEIYTPXDTTISSXFRTFQCLQKDYRDENDM 653
           LG TVP  V PP H I  +  I  P     +  F     L   Y   NDM
Sbjct: 586 LGITVPERVNPPDHYIDILEGIVKPESGINAKHFPLHWMLYNGYEVPNDM 635


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,284,720
Number of Sequences: 37544
Number of extensions: 310386
Number of successful extensions: 666
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)