Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_P15
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10975-1|CAA71871.1|  252|Drosophila melanogaster Trf-proximal p...   121   1e-27
BT003473-1|AAO39476.1|  252|Drosophila melanogaster RE63851p pro...   121   1e-27
AE014134-1391|AAF52599.2|  252|Drosophila melanogaster CG18780-P...   121   1e-27
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.         33   0.26 
BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p pro...    33   0.26 
BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p pro...    33   0.26 
AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB...    33   0.26 
AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA...    33   0.26 
AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-P...    28   9.9  

>Y10975-1|CAA71871.1|  252|Drosophila melanogaster Trf-proximal
           protein protein.
          Length = 252

 Score =  121 bits (291), Expect = 1e-27
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = +3

Query: 258 KNIHVIADGLFDLLMMKLSQHYTSKKQTKIESKGPRFELGDFCVKLGSVTMNQNFKGILI 437
           K + ++AD +FDLLM+K++  +TSKKQTKIES+G RFE GDF +KLGSVTM ++FKGILI
Sbjct: 83  KQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILI 142

Query: 438 EVEYRPCVMANAVWGLLREFLQGLLGPTVPVQPPQH 545
           E+EY+ CV+    W ++RE LQG LG  V    P +
Sbjct: 143 EIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSY 178



 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
 Frame = +2

Query: 23  LGVTVLQQYPVPENKTGTYVVELLTKRILALGATQQGQFLVDCESYLSHPLM---GTTKT 193
           +GVT+LQ YP+PE K+G ++++ L+KR+LALGAT  GQFLVDCE+++S P        + 
Sbjct: 1   MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETFISTPQPHNGAPGRA 60

Query: 194 VHILHNSEQPASVFSILE 247
           VH+LHNSE PAS FSI++
Sbjct: 61  VHVLHNSEYPASTFSIID 78


>BT003473-1|AAO39476.1|  252|Drosophila melanogaster RE63851p
           protein.
          Length = 252

 Score =  121 bits (291), Expect = 1e-27
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = +3

Query: 258 KNIHVIADGLFDLLMMKLSQHYTSKKQTKIESKGPRFELGDFCVKLGSVTMNQNFKGILI 437
           K + ++AD +FDLLM+K++  +TSKKQTKIES+G RFE GDF +KLGSVTM ++FKGILI
Sbjct: 83  KQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILI 142

Query: 438 EVEYRPCVMANAVWGLLREFLQGLLGPTVPVQPPQH 545
           E+EY+ CV+    W ++RE LQG LG  V    P +
Sbjct: 143 EIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSY 178



 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
 Frame = +2

Query: 23  LGVTVLQQYPVPENKTGTYVVELLTKRILALGATQQGQFLVDCESYLSHPLM---GTTKT 193
           +GVT+LQ YP+PE K+G ++++ L+KR+LALGAT  GQFLVDCE+++S P        + 
Sbjct: 1   MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETFISTPQPHNGAPGRA 60

Query: 194 VHILHNSEQPASVFSILE 247
           VH+LHNSE PAS FSI++
Sbjct: 61  VHVLHNSEYPASTFSIID 78


>AE014134-1391|AAF52599.2|  252|Drosophila melanogaster CG18780-PA
           protein.
          Length = 252

 Score =  121 bits (291), Expect = 1e-27
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = +3

Query: 258 KNIHVIADGLFDLLMMKLSQHYTSKKQTKIESKGPRFELGDFCVKLGSVTMNQNFKGILI 437
           K + ++AD +FDLLM+K++  +TSKKQTKIES+G RFE GDF +KLGSVTM ++FKGILI
Sbjct: 83  KQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILI 142

Query: 438 EVEYRPCVMANAVWGLLREFLQGLLGPTVPVQPPQH 545
           E+EY+ CV+    W ++RE LQG LG  V    P +
Sbjct: 143 EIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSY 178



 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
 Frame = +2

Query: 23  LGVTVLQQYPVPENKTGTYVVELLTKRILALGATQQGQFLVDCESYLSHPLM---GTTKT 193
           +GVT+LQ YP+PE K+G ++++ L+KR+LALGAT  GQFLVDCE+++S P        + 
Sbjct: 1   MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETFISTPQPHNGAPGRA 60

Query: 194 VHILHNSEQPASVFSILE 247
           VH+LHNSE PAS FSI++
Sbjct: 61  VHVLHNSEYPASTFSIID 78


>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
          Length = 1231

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 536 RLDRNSWP*QSLKELSKQTPDRISHYA 456
           R DR+ W    LK +SKQT D+I+H+A
Sbjct: 419 REDRDKWITNELKSISKQTRDKIAHHA 445


>BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p
           protein.
          Length = 1054

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 536 RLDRNSWP*QSLKELSKQTPDRISHYA 456
           R DR+ W    LK +SKQT D+I+H+A
Sbjct: 242 REDRDKWITNELKSISKQTRDKIAHHA 268


>BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p
           protein.
          Length = 1200

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 536 RLDRNSWP*QSLKELSKQTPDRISHYA 456
           R DR+ W    LK +SKQT D+I+H+A
Sbjct: 388 REDRDKWITNELKSISKQTRDKIAHHA 414


>AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB,
           isoform B protein.
          Length = 1054

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 536 RLDRNSWP*QSLKELSKQTPDRISHYA 456
           R DR+ W    LK +SKQT D+I+H+A
Sbjct: 242 REDRDKWITNELKSISKQTRDKIAHHA 268


>AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA,
           isoform A protein.
          Length = 1200

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 536 RLDRNSWP*QSLKELSKQTPDRISHYA 456
           R DR+ W    LK +SKQT D+I+H+A
Sbjct: 388 REDRDKWITNELKSISKQTRDKIAHHA 414


>AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-PA
           protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 416 LIHSN*SELHTEISELKPRSFALDFGLFLRSIMLR 312
           LI ++     TE++  K  +  LDFGL LR+++L+
Sbjct: 18  LISADPGPQDTEVAREKRGTITLDFGLLLRNLLLK 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,110,449
Number of Sequences: 53049
Number of extensions: 566362
Number of successful extensions: 1511
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)