Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_P13
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0005 + 17063717-17063866,17065737-17065855,17066903-170672... 78 5e-15
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 78 7e-15
02_04_0098 + 19701999-19702185,19703698-19704551,19704732-197048... 32 0.46
06_03_1245 + 28652216-28652524,28652564-28652761,28652880-286529... 29 2.4
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 29 2.4
10_08_0734 + 20195434-20196225 28 5.6
06_02_0214 + 13141213-13143741 28 5.6
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 28 5.6
02_01_0293 + 1955439-1956457,1957002-1957322,1957405-1957411,195... 28 5.6
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 28 7.4
02_02_0724 + 13349419-13349641,13349880-13349974,13350366-133506... 28 7.4
01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175 28 7.4
01_05_0739 + 24807181-24809121 28 7.4
11_06_0745 + 26857968-26859955,26860697-26860712 27 9.8
01_03_0032 - 11795368-11795385,11795607-11795670,11795979-117960... 27 9.8
>05_04_0005 +
17063717-17063866,17065737-17065855,17066903-17067218,
17067579-17067722,17067909-17067926,17068853-17068954,
17069358-17069461,17069543-17069669,17069809-17069961,
17070261-17070361,17070538-17070739,17071245-17071469
Length = 586
Score = 78.2 bits (184), Expect = 5e-15
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Frame = +3
Query: 264 KTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP-----VQSKLGPWIASRRTEEVKKK 428
K +++LN+GGPET D V +L + D D+I+LP +Q L +I+ R + K+
Sbjct: 167 KIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 226
Query: 429 YSEIGGGSPILKWTNSQ--GSLLTQALDQML-PESAPHKHYVAFRYVPPFTEDA 581
Y+ IGGGSP+ + T++Q G + +AL + L + P K YV RY PFTE+A
Sbjct: 227 YASIGGGSPLRQITDAQIIGVNMAEALRKALCDKDIPAKVYVGMRYWHPFTEEA 280
>09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 77.8 bits (183), Expect = 7e-15
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Frame = +3
Query: 243 SGTAVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP-----VQSKLGPWIASRR 407
S A + K +++LN+GGPET D V +L + D D+I+LP +Q L I++ R
Sbjct: 707 SSHAAEEKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFR 766
Query: 408 TEEVKKKYSEIGGGSPILKWTNSQGSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDA 581
+ K+ Y+ IGGGSP+ K T+ Q + L AL + ++ YV RY PFTE+A
Sbjct: 767 APKSKEGYASIGGGSPLRKITDEQANALKVALKK---KNLNANIYVGMRYWYPFTEEA 821
>02_04_0098 +
19701999-19702185,19703698-19704551,19704732-19704890,
19705290-19705537,19705837-19705927,19706066-19706251
Length = 574
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 410 GPSTGYPRSQFTLHRKLDHVSVCHYPVKIVTNLVRGLRPTHIQHDYSSLRFDSGS 246
G T P S++ L LD +Y V I + P + DY LR+D G+
Sbjct: 254 GLDTSVPSSKYVLKNSLDLTRYDYYTVGIYNKVTERYVPDNPAGDYHRLRYDYGN 308
>06_03_1245 +
28652216-28652524,28652564-28652761,28652880-28652981,
28653663-28653822,28654057-28654439
Length = 383
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 246 GTAVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP 368
G AVK + ++ GGP ++G Y R+ T RD + LP
Sbjct: 190 GKAVKTRETVLSTRSGGPNYQVELGRYDGRVST-RDSVVLP 229
>02_05_0999 + 33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 295 PPIFSMTIAVLGLTAVPEAVLNAGGKRGSI 206
PP FS I LGL+ V + L +GG RG++
Sbjct: 954 PPPFSAQIGDLGLSKVKQHTLVSGGVRGTL 983
>10_08_0734 + 20195434-20196225
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 480 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAF 584
G+ L + L + LP ++PH H+V R E+ F
Sbjct: 188 GAELRELLHRFLPLNSPHHHHVILRAFAEIWEEVF 222
>06_02_0214 + 13141213-13143741
Length = 842
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 243 SGTAVKPKTAIVMLNMGGPETTDQVGDYLHRI-MTDRDMIQLPVQSKLGPWIASRRTEEV 419
SG + +P + +NMGGP+ T D L R +TD+ + P +R
Sbjct: 207 SGLSTQPLETVYRVNMGGPKVTAD-NDTLSRTWVTDKKYLVNP--------SVTREVNGG 257
Query: 420 KKKYSEIGGGSPIL 461
K Y + GG +P++
Sbjct: 258 KVNYMKGGGSTPLI 271
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 315 VGDYLHRIMTDRDMIQLPVQSKLGPWIASRRTEEVKKKYSEIGGGSPILKWTNSQGSLLT 494
+ YL + + + LP +L + ++ E++K ++ + G+P+ +++ SL
Sbjct: 202 LASYLLKNLKKEEKETLPASFELAEKVINKCYEKLKPVFTPLLRGTPLDEYSEVVTSLFE 261
Query: 495 QALDQMLPES--APHKHYVA 548
ALD + ++ AP K VA
Sbjct: 262 DALDAGVADNSDAPGKDMVA 281
>02_01_0293 +
1955439-1956457,1957002-1957322,1957405-1957411,
1957954-1958041,1958143-1958324,1958508-1958644,
1958790-1958856,1959132-1959246,1959390-1959501,
1960420-1960495,1960576-1960758,1961166-1961326,
1961463-1961532,1962721-1962928,1963015-1963304,
1963388-1963509,1963605-1963749,1964040-1964113,
1964464-1964911
Length = 1274
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 415 SSVLLLAIHGPSLLCTGSWIMSLSVIIL*R*SPTW-SVVSGPPIFSMTIAVLGL 257
S LL +IHGPSLLC + SV+ + SP + S + P + + +GL
Sbjct: 160 SGWLLASIHGPSLLCIWETSNNPSVLWMFDASPEYLSCLRRDPFDARHLCAIGL 213
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 276 VMLNMGGPETTDQVGDYLHRIMTDRDMIQLPVQSKLGPWIASRR 407
VM N+G P + D++ D LH +D D Q+ L +A RR
Sbjct: 114 VMANLGDPLSDDELADMLHEADSDGDG-QINYNEFLKVMMAKRR 156
>02_02_0724 +
13349419-13349641,13349880-13349974,13350366-13350653,
13352838-13352963,13353045-13353204,13354142-13354190,
13354502-13354772,13356071-13356196,13357076-13357231,
13357815-13358058,13358181-13358627,13359348-13359478
Length = 771
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 432 SEIGGGSPILKWTNSQGSLLTQALDQMLPESAPHKHYVAFR 554
SE SPI W GS L A+D L S PH ++ R
Sbjct: 303 SESDSDSPIESWYRISGSQLLAAMD--LSSSVPHSELLSAR 341
>01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175
Length = 418
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 233 QHGFRNRCQT*DCYSHAEYGWAGDH 307
+HG ++ +C+ H GW GDH
Sbjct: 330 RHGSESQSHDLECHLHGVAGWHGDH 354
>01_05_0739 + 24807181-24809121
Length = 646
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 227 CIQHGFRNRCQT*DCYSHAE--YGWAGDHGPG 316
CI+HG RCQ +C AE G+ HG G
Sbjct: 354 CIRHGGGKRCQKENCIRSAEGHSGFCISHGGG 385
>11_06_0745 + 26857968-26859955,26860697-26860712
Length = 667
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 313 WSVVSGPPIFSMTIAVLGLTAVPEAVLNAGGKRGSI 206
WS++S PP I +L V ++ N GK G++
Sbjct: 431 WSILSSPPALLQRIELLPCVCVFSSIPNWIGKHGNL 466
>01_03_0032 -
11795368-11795385,11795607-11795670,11795979-11796046,
11796319-11796455,11796722-11796783,11796889-11796956,
11797045-11797126,11798160-11798269
Length = 202
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 493 VNKLP*LFVHFNIGDPPPISEYFFLTSSVLLLAIHGPSLLCTG 365
VN +P LF FNI D P I + F + + + G +++C G
Sbjct: 96 VNNVP-LF--FNIRDDPDIMKKFQVDRGAIKFVLSGANIMCPG 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,331,027
Number of Sequences: 37544
Number of extensions: 357848
Number of successful extensions: 834
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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