Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_P13
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical p...    28   6.6  
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U97008-17|AAB52316.2|  310|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = -3

Query: 415 SSVLLLAIHGPSLLCTGSWIMSLSVIIL*R*SPTWSVVSGPPIFSMTIAVLGLTAVPEAV 236
           +++++L I    + C    I+ LS++I     PTW +     ++S  +    + ++   V
Sbjct: 393 AALMILPIQYYDIQCMRWVIIMLSLMIAAGIDPTWKINH---LYSAELFPTSVRSMARGV 449

Query: 235 LNAGGKRGSIM 203
            NAGG+ GS+M
Sbjct: 450 CNAGGRLGSVM 460


>Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFRXGGKRRSGQSYHILAAILLT 647
           GS + +    ML   A  KH+VAF    P+    F   GK    +  H   A +L+
Sbjct: 46  GSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWILS 101


>Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFRXGGKRRSGQSYHILAAILLT 647
           GS + +    ML   A  KH+VAF    P+    F   GK    +  H   A +L+
Sbjct: 216 GSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWILS 271


>Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFRXGGKRRSGQSYHILAAILLT 647
           GS + +    ML   A  KH+VAF    P+    F   GK    +  H   A +L+
Sbjct: 46  GSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWILS 101


>Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFRXGGKRRSGQSYHILAAILLT 647
           GS + +    ML   A  KH+VAF    P+    F   GK    +  H   A +L+
Sbjct: 216 GSRIPKKEKDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWILS 271


>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical
           protein C34G6.1 protein.
          Length = 1768

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 554 IRSSVHGRRLQGRWKATERTE-LSYSRSY 637
           I ++VH  R+ G WK   R E L+Y++ Y
Sbjct: 850 IATAVHPSRIGGEWKFEARNELLAYAKDY 878


>U97008-17|AAB52316.2|  310|Caenorhabditis elegans Hypothetical
           protein C03G6.17 protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 511 CSRSQPLISTTW--RSDTFLRSRKTPSGXVESDGADRVIIFSQLSSS 645
           C R +  I T W   SDTF R     +G +   G  R++  ++LSS+
Sbjct: 176 CIRDRKKIMTAWFNLSDTFTRVVLDDTGKIVGYGTIRIVSQNKLSSA 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,662,594
Number of Sequences: 27780
Number of extensions: 301950
Number of successful extensions: 705
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)