Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_P04
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6BMD2 Cluster: Similar to sp|Q03496 Saccharomyces cere...    35   1.5  
UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,...    33   7.8  
UniRef50_A6UY67 Cluster: Phage major capsid protein, P2 family; ...    33   7.8  
UniRef50_Q23K56 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q6BMD2 Cluster: Similar to sp|Q03496 Saccharomyces
           cerevisiae YMR259c; n=1; Debaryomyces hansenii|Rep:
           Similar to sp|Q03496 Saccharomyces cerevisiae YMR259c -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 1496

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +2

Query: 386 ITAAIHRASVFEKVLVPCGVLLVHSQVQATLLLPLT*KI*YFILHILTSDLS 541
           + + +HR   F KVL+P  V L H  V   + LP T +  YF++ IL+ +++
Sbjct: 103 LVSLLHRLIGFCKVLMPLHVDLFHRWVDQAMKLPCTSRNLYFLVDILSKEIN 154


>UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein, partial - Danio rerio
          Length = 413

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 148 LAFRXARYNFDAVRPAPICGDANQPGQCHNVHISTN 255
           L+ +   YN+ A+ PAP+   A  P  C N+ +ST+
Sbjct: 65  LSQQQQHYNYQAILPAPLKRVAESPNSCPNITLSTS 100


>UniRef50_A6UY67 Cluster: Phage major capsid protein, P2 family;
           n=2; Pseudomonas aeruginosa PA7|Rep: Phage major capsid
           protein, P2 family - Pseudomonas aeruginosa PA7
          Length = 342

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -1

Query: 466 DLTVYQQDSTWNKHLLEN 413
           +L++Y QDS+W +HLLEN
Sbjct: 289 NLSIYYQDSSWRRHLLEN 306


>UniRef50_Q23K56 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 315

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -2

Query: 345 VLFNWDFLHLTICCHVVDTRRFYFMKSIVKICGYVYIVALTWLVG 211
           +LF WD++  T    ++D   FYF  +   +  +V++ A+ + +G
Sbjct: 230 LLFIWDYISHTHAEKLIDCNEFYFSSNFFTLIIFVFVKAICYFLG 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,741,620
Number of Sequences: 1657284
Number of extensions: 12490134
Number of successful extensions: 27670
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27665
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)