Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_P04
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.3  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   8.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +1

Query: 196 PICGDANQPGQCHNVHISTNFY-----YGFHEVKTSG 291
           P+CG+++  GQC   +I    Y     YG+    T G
Sbjct: 337 PLCGNSSGAGQCDEGYICLQGYGKNPNYGYTSFDTFG 373


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 406 SKRFREGACSMWSLVGTQSS 465
           SKR  E  C+ W L G +S+
Sbjct: 546 SKRREEDVCASWPLCGEKSA 565


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 214 WRHRKSEQVEQHQNY 170
           WR +K E+ EQ  NY
Sbjct: 242 WRKQKREEQEQFSNY 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,735
Number of Sequences: 2352
Number of extensions: 14184
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)