Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_O22
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 73 1e-13
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 57 1e-08
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 56 2e-08
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 44 1e-04
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 42 5e-04
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.41
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm rec... 30 1.6
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein. 28 6.7
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 8.8
AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 73.3 bits (172), Expect = 1e-13
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 172 LNKRTVK-GKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFXXXXXXXXXXXXXXXDRA 348
L+KRT K G+ ++L++W+G+ E +S+WEP ENL C E++ F +
Sbjct: 25 LDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF-----------EREFSKR 73
Query: 349 KKRVRESSEETSSGRKGRGASVSSADXXXXXXXXXXXXXXXTGFDKGLKAEKIIGASDAT 528
+K +R+ + S AD +G + + I+G +
Sbjct: 74 EKPIRKRHSQKPE------PSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGP 127
Query: 529 GELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLT 648
GEL FL K++D D A L+PAK N + P QVI +YE +LT
Sbjct: 128 GELHFLCKFSD-DTARLLPAKEVNSRYPSQVIRYYESKLT 166
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 73.3 bits (172), Expect = 1e-13
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 172 LNKRTVK-GKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFXXXXXXXXXXXXXXXDRA 348
L+KRT K G+ ++L++W+G+ E +S+WEP ENL C E++ F +
Sbjct: 25 LDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF-----------EREFSKR 73
Query: 349 KKRVRESSEETSSGRKGRGASVSSADXXXXXXXXXXXXXXXTGFDKGLKAEKIIGASDAT 528
+K +R+ + S AD +G + + I+G +
Sbjct: 74 EKPIRKRHSQKPE------PSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGP 127
Query: 529 GELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERLT 648
GEL FL K++D D A L+PAK N + P QVI +YE +LT
Sbjct: 128 GELHFLCKFSD-DTARLLPAKEVNSRYPSQVIRYYESKLT 166
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 172 LNKRTVK-GKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFXXXXXXXXXXXXXXXDRA 348
L+KRT K G+ ++L++W+G+ E +S+WEP ENL C E++ F +
Sbjct: 25 LDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF-----------EREFSKR 73
Query: 349 KKRVRESSEETSSGRKGRGASVSSADXXXXXXXXXXXXXXXTGFDKGLKAEKIIGASDAT 528
+K +R+ + S AD +G + + I+G +
Sbjct: 74 EKPIRKRHSQKPE------PSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGP 127
Query: 529 GELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYE 636
GEL FL K++D D A L+PAK N + V A+ E
Sbjct: 128 GELHFLCKFSD-DTARLLPAKEVNSRYRPFVDAYGE 162
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 172 LNKRTVK-GKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFXXXXXXXXXXXXXXXDRA 348
L+KRT K G+ ++L++W+G+ E +S+WEP ENL C E++ F +
Sbjct: 25 LDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF-----------EREFSKR 73
Query: 349 KKRVRESSEETSSGRKGRGASVSSADXXXXXXXXXXXXXXXTGFDKGLKAEKIIGASDAT 528
+K +R+ + S AD +G + + I+G +
Sbjct: 74 EKPIRKRHSQKPE------PSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGP 127
Query: 529 GELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYE 636
GEL FL K++D D A L+PAK N + V A+ E
Sbjct: 128 GELHFLCKFSD-DTARLLPAKEVNSRYRPFVDAYGE 162
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 172 LNKRTVK-GKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFXXXXXXXXXXXXXXXDRA 348
L+KRT K G+ ++L++W+G+ E +S+WEP ENL C E++ F +
Sbjct: 25 LDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF-----------EREFSKR 73
Query: 349 KKRVRESSEETSSGRKGRGASVSSADXXXXXXXXXXXXXXXTGFDKGLKAEKIIGASDAT 528
+K +R+ + S AD +G + + I+G +
Sbjct: 74 EKPIRKRHSQKPE------PSEDQADPEEDKDEKKETNQNDKFSLEGKQLKCIVGLTKGP 127
Query: 529 GELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYE 636
GEL FL K++D D A L+PAK N + V A+ E
Sbjct: 128 GELHFLCKFSD-DTARLLPAKEVNSRYRPFVDAYGE 162
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 56.0 bits (129), Expect = 2e-08
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 172 LNKRTVKGKIQYLLKWKGYKEEESTWEPVENLDCEELIKTF 294
LNKR +G +Y +KW+G+ E E +WEP+ENL C+ +I+ +
Sbjct: 43 LNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 487 GLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERL 645
G + IIG + A GEL FL K++D D L+P + ANV+ P QVI FYE RL
Sbjct: 119 GKTLKTIIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKFYETRL 170
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 56.0 bits (129), Expect = 2e-08
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 172 LNKRTVKGKIQYLLKWKGYKEEESTWEPVENLDCEELIKTF 294
LNKR +G +Y +KW+G+ E E +WEP+ENL C+ +I+ +
Sbjct: 43 LNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 487 GLKAEKIIGASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEERL 645
G + IIG + A GEL FL K++D D L+P + ANV+ P QVI FYE RL
Sbjct: 119 GKTLKTIIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKFYETRL 170
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 196 KIQYLLKWKGYKEEESTWEPVENLD-CEELIK 288
K YL+ W+GY +E TWEP ENL+ CEEL K
Sbjct: 48 KYAYLVHWRGYDWKERTWEPEENLENCEELQK 79
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 172 LNKRTVKGKIQYLLKWKGYKEEESTWEPVENLDCEELIKTF 294
L R KGK ++ +KW GY ++WEP EN+ LI+ F
Sbjct: 14 LEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAF 54
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 205 YLLKWKGYKEEESTWEPVENL 267
+L+KW GY +E TWEP N+
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI 115
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.9 bits (69), Expect = 0.41
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 208 LLKWKGYKEEESTWEPVENLDCEEL 282
L+KWK EE TWEP+E + +++
Sbjct: 1123 LIKWKSLGYEEVTWEPIEMIPADKV 1147
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 172 LNKRTVKGKIQYLLKWKGYKE---EESTWEPVENLD-CEELIKTF 294
L R VKG YL++WKGY WE E+LD C++L+ +
Sbjct: 93 LAHRKVKGSPLYLVQWKGYPHPVWNSEMWE--EDLDNCKDLLAAY 135
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 211 LKWKGYKEEESTWEPVENL 267
++W GY +E TWEP E+L
Sbjct: 43 VRWLGYGADEDTWEPEEDL 61
>AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm
receptor protein 63 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 274 HSLSFQQAPKYSLPPYSLSISINIGSF 194
+ L + PKY++ PY+L S+N G+F
Sbjct: 170 YQLLISELPKYNITPYNLDGSVNWGNF 196
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 202 QYLLKWKGYKEEESTWEPVENLDCEELIKTF 294
+YL+KW G + TWE E + E IK +
Sbjct: 333 EYLIKWSGLPYSDCTWED-EKMVAPEQIKAY 362
>Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical
protein ZK520.4d protein.
Length = 743
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 514 ASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEE 639
A++ +G + +K ++D ++VPA+ A K + AFY+E
Sbjct: 181 ANEVSGVINSFVKMEETD-FDVVPAEGARYKARESTTAFYQE 221
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical
protein ZK520.4c protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 514 ASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEE 639
A++ +G + +K ++D ++VPA+ A K + AFY+E
Sbjct: 198 ANEVSGVINSFVKMEETD-FDVVPAEGARYKARESTTAFYQE 238
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical
protein ZK520.4b protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 514 ASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEE 639
A++ +G + +K ++D ++VPA+ A K + AFY+E
Sbjct: 181 ANEVSGVINSFVKMEETD-FDVVPAEGARYKARESTTAFYQE 221
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical
protein ZK520.4a protein.
Length = 850
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 514 ASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEE 639
A++ +G + +K ++D ++VPA+ A K + AFY+E
Sbjct: 257 ANEVSGVINSFVKMEETD-FDVVPAEGARYKARESTTAFYQE 297
>U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein.
Length = 743
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 514 ASDATGELMFLIKWTDSDEAELVPAKVANVKCPQQVIAFYEE 639
A++ +G + +K ++D ++VPA+ A K + AFY+E
Sbjct: 181 ANEVSGVINSFVKMEETD-FDVVPAEGARYKARESTTAFYQE 221
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 190 KGKIQYLLKWKGYKEEESTWE 252
K + YL+KWK E +TWE
Sbjct: 514 KSQQDYLVKWKELSYEHATWE 534
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 190 KGKIQYLLKWKGYKEEESTWE 252
K + YL+KWK E +TWE
Sbjct: 514 KSQQDYLVKWKELSYEHATWE 534
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 190 KGKIQYLLKWKGYKEEESTWE 252
K + YL+KWK E +TWE
Sbjct: 514 KSQQDYLVKWKELSYEHATWE 534
>AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical
protein Y54F10BM.10 protein.
Length = 302
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 196 KIQYLLKWKGYKEEESTWEPVENLDCEEL 282
KI YL +WK K + EP+EN+ E+L
Sbjct: 190 KITYLEQWKLTKSFKYFGEPLENIPLEKL 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,807,671
Number of Sequences: 27780
Number of extensions: 172508
Number of successful extensions: 541
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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