Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_O07
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical p...   101   3e-22
Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical p...   101   3e-22
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...   101   3e-22
Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical pr...    34   0.076
U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    30   1.6  
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    28   6.6  
Z82276-6|CAJ15166.1|  305|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF100306-8|ABB88213.1|  860|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF100306-7|ABB88214.1|  895|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical
           protein W02B12.15b protein.
          Length = 134

 Score =  101 bits (243), Expect = 3e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 268 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 447
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 448 VVR 456
           +V+
Sbjct: 128 IVK 130


>Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical
           protein W02B12.15a protein.
          Length = 103

 Score =  101 bits (243), Expect = 3e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 268 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 447
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 37  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 96

Query: 448 VVR 456
           +V+
Sbjct: 97  IVK 99


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score =  101 bits (243), Expect = 3e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 268 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 447
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 448 VVR 456
           +V+
Sbjct: 128 IVK 130


>Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical
           protein M88.7 protein.
          Length = 160

 Score = 34.3 bits (75), Expect = 0.076
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 307 KVVDFIDIEDITEKASLCRCWRSKNWPYCDGSH 405
           K V FI  +D+T    LC C ++ N P+CDGSH
Sbjct: 116 KPVRFIPDKDMT--VWLCNCKQTNNRPFCDGSH 146


>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 576 LRKCLKRNALYNIISVLFISYKT 644
           LRKCLKR ++  +IS+ F+S KT
Sbjct: 16  LRKCLKRMSVAQLISISFLSKKT 38


>Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical
           protein ZC482.8 protein.
          Length = 375

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 330 NVNKVYNFINVLPD-TRVYLTTASFSGFFYCLVRVVRYT 217
           N++K +  + VL D T+     ASFSGFF  LV +V  T
Sbjct: 32  NLHKHFELVTVLTDVTKQLYDIASFSGFFLNLVHLVILT 70


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 348 LLSYILNVNKVY-NFINVLPDTRVYLTTASFSGFFYCLV 235
           +LSY+L+  + + NFI  + D+  YLT+  F    YC++
Sbjct: 560 VLSYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCII 598


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 533 NNSFLHNFFQNYTCYIFFCI 474
           NNS +  F+ NY  Y F CI
Sbjct: 12  NNSLIGKFYWNYLIYYFLCI 31


>Z82276-6|CAJ15166.1|  305|Caenorhabditis elegans Hypothetical
           protein K03D3.12 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = -2

Query: 348 LLSYILNVNKVYNFINVLPDTRVYLTTASFSGFFYCLV 235
           ++  I  + ++Y+++ +     VY+T+ S SGFF+ L+
Sbjct: 61  VVKQIFAMVRIYSYLFIPLTASVYMTSVSESGFFFKLL 98


>U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical
           protein ZC204.7 protein.
          Length = 302

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 576 LRKCLKRNALYNIISVLFISYKTT 647
           L+KCLK+ ++  +IS+ F+S  TT
Sbjct: 16  LQKCLKQMSVAQLISISFLSKNTT 39


>AF100306-8|ABB88213.1|  860|Caenorhabditis elegans Hypothetical
           protein T24C4.6a protein.
          Length = 860

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 465 SQLNTKKYIASVVLEKIM*KRIIALFYLRLSISNHG 572
           SQ+N  +Y+ +V+L   + + + A F  + +I NHG
Sbjct: 24  SQINNDEYMETVILPVPLSQELFARFRNKWNIHNHG 59


>AF100306-7|ABB88214.1|  895|Caenorhabditis elegans Hypothetical
           protein T24C4.6b protein.
          Length = 895

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 465 SQLNTKKYIASVVLEKIM*KRIIALFYLRLSISNHG 572
           SQ+N  +Y+ +V+L   + + + A F  + +I NHG
Sbjct: 24  SQINNDEYMETVILPVPLSQELFARFRNKWNIHNHG 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,197,386
Number of Sequences: 27780
Number of extensions: 300990
Number of successful extensions: 764
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)