Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_O04
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           27   0.16 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    26   0.37 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.64 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   1.9  

>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +3

Query: 375 YAPSHHNQTEERPSGHRR-SFNLVSFTVPCEFAARITGAALPAEDLG-AGDQCSRGV 539
           + P  H + EER   HRR + +L+SF      +A     A     LG AG  C +GV
Sbjct: 1   FEPLEHFENEERADRHRRVTCDLLSFKGQVNDSA----CAANCHSLGKAGGHCEKGV 53


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +3

Query: 375 YAPSHHNQTEERPSGHRR-SFNLVSFTVPCEFAARITGAALPAEDLG-AGDQCSRGV 539
           + P  H + EER   HRR + +L+SF      +A     A     LG AG  C +GV
Sbjct: 26  FEPLEHFENEERADRHRRVTCDLLSFKGQVNDSA----CAANCLSLGKAGGHCEKGV 78


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 58  NRPHAGEPVGGMASHGALG 114
           ++ H  +PVG  A+HGA G
Sbjct: 330 DKMHIDDPVGASATHGASG 348


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 375 YAPSHHNQTEERPSGHRR-SFNLVSF 449
           + P  H + EER   HRR + +L+SF
Sbjct: 26  FEPLEHFENEERADRHRRVTCDLLSF 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,952
Number of Sequences: 438
Number of extensions: 2113
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)