Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_O02
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 249 2e-66
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 249 2e-66
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 249 2e-66
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 104 6e-23
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 104 6e-23
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 90 1e-18
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 90 1e-18
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 83 2e-16
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 83 2e-16
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 82 3e-16
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 82 3e-16
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 77 8e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 76 2e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 76 2e-14
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 70 2e-12
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 70 2e-12
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 70 2e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 1e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 59 3e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 58 5e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 58 5e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 51 6e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 51 6e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 8e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 47 1e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 47 1e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 47 1e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 249 bits (609), Expect = 2e-66
Identities = 113/142 (79%), Positives = 126/142 (88%)
Frame = +3
Query: 228 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 407
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 408 MGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 587
MGKTAVFV+ TLQQL P + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 588 PIQKDEEVLKTACPHIVVGTPG 653
I+KDEE L CPHIVVGTPG
Sbjct: 149 AIKKDEERLANDCPHIVVGTPG 170
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 249 bits (609), Expect = 2e-66
Identities = 113/142 (79%), Positives = 126/142 (88%)
Frame = +3
Query: 228 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 407
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 408 MGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 587
MGKTAVFV+ TLQQL P + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 588 PIQKDEEVLKTACPHIVVGTPG 653
I+KDEE L CPHIVVGTPG
Sbjct: 149 AIKKDEERLANDCPHIVVGTPG 170
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 249 bits (609), Expect = 2e-66
Identities = 113/142 (79%), Positives = 126/142 (88%)
Frame = +3
Query: 228 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 407
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 28 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 87
Query: 408 MGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 587
MGKTAVFV+ TLQQL P + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 88 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 147
Query: 588 PIQKDEEVLKTACPHIVVGTPG 653
I+KDEE L CPHIVVGTPG
Sbjct: 148 AIKKDEERLANDCPHIVVGTPG 169
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 104 bits (249), Expect = 6e-23
Identities = 57/140 (40%), Positives = 80/140 (57%)
Frame = +3
Query: 234 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 414 KTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 593
KTA F ++ LQ++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 594 QKDEEVLKTACPHIVVGTPG 653
+ D+ L+ H+VVGTPG
Sbjct: 138 RDDQRKLEAGI-HVVVGTPG 156
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 104 bits (249), Expect = 6e-23
Identities = 57/140 (40%), Positives = 80/140 (57%)
Frame = +3
Query: 234 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 414 KTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 593
KTA F ++ LQ++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 594 QKDEEVLKTACPHIVVGTPG 653
+ D+ L+ H+VVGTPG
Sbjct: 138 RDDQRKLEAGI-HVVVGTPG 156
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 89.8 bits (213), Expect = 1e-18
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +3
Query: 237 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 414 KTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 593
KT VF + ++ L SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 594 QKDEEVLKTACPHIVVGTPG 653
+ + LK P IV+GTPG
Sbjct: 130 KLNLIDLKQTRPQIVIGTPG 149
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 89.8 bits (213), Expect = 1e-18
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +3
Query: 237 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 414 KTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 593
KT VF + ++ L SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 594 QKDEEVLKTACPHIVVGTPG 653
+ + LK P IV+GTPG
Sbjct: 130 KLNLIDLKQTRPQIVIGTPG 149
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/128 (34%), Positives = 73/128 (57%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F DF L ++L I + G+E PS +Q I A+ G DIL +AK+G GKT + + +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 450 LAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 629
+ P+ + +V+ TRELA Q S+ SK++ ++V V GG + +D+ +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDL-RDDIMRLNGTV 162
Query: 630 HIVVGTPG 653
H+V+ TPG
Sbjct: 163 HLVIATPG 170
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/123 (38%), Positives = 64/123 (52%)
Frame = +3
Query: 285 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSE 464
L+ ++LR I GFE PS +Q IP + D++ QA+SG GKTA F ++ LQ L
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 465 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 644
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 645 TPG 653
TPG
Sbjct: 151 TPG 153
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 82.2 bits (194), Expect = 3e-16
Identities = 46/123 (37%), Positives = 64/123 (52%)
Frame = +3
Query: 285 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSE 464
L+ ++LR I GFE PS +Q +P + D++ QA+SG GKTA F ++ LQ L
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 465 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 644
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 645 TPG 653
TPG
Sbjct: 151 TPG 153
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 82.2 bits (194), Expect = 3e-16
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F L +IL+A G+ P+ +Q CIP A+ G DI A +G GKTA FVL L++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 450 L---APSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 620
+ S VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRS 268
Query: 621 ACPHIVVGTPG 653
P +VV TPG
Sbjct: 269 G-PDVVVATPG 278
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 77.4 bits (182), Expect = 8e-15
Identities = 44/147 (29%), Positives = 72/147 (48%)
Frame = +3
Query: 213 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 392
+V ++ K + F + + + A G+ PS++Q +P A+ G D++
Sbjct: 27 KVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIG 86
Query: 393 QAKSGMGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 572
A++G GKT F + LQ L + LV+ TRELAFQI +++E + G+ +V
Sbjct: 87 LAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI-GLIAAV 145
Query: 573 FFGGMPIQKDEEVLKTACPHIVVGTPG 653
GG+ + L PHI+V TPG
Sbjct: 146 IVGGVDMAAQAMALARR-PHIIVATPG 171
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/104 (39%), Positives = 61/104 (58%)
Frame = +3
Query: 342 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQIS 521
VQ CIP+ + G DIL A++G GKT F + LQ+L+ +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 522 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+++ K ++ ++ SV GG + L PH+VV TPG
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPG 216
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/104 (39%), Positives = 61/104 (58%)
Frame = +3
Query: 342 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSESHVYVLVMCHTRELAFQIS 521
VQ CIP+ + G DIL A++G GKT F + LQ+L+ +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 522 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+++ K ++ ++ SV GG + L PH+VV TPG
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPG 216
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 264 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 437
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 438 TLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 611
L ++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 328
Query: 612 LKTACPHIVVGTPG 653
+ IV+GTPG
Sbjct: 329 TE----QIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 264 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 437
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 438 TLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 611
L ++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 353
Query: 612 LKTACPHIVVGTPG 653
+ IV+GTPG
Sbjct: 354 TE----QIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 264 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 437
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 438 TLQQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 611
L ++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 737
Query: 612 LKTACPHIVVGTPG 653
+ IV+GTPG
Sbjct: 738 TE----QIVIGTPG 747
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +3
Query: 261 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 440
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 441 LQQLAPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 617
LQ+L + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 618 TACPHIVVGTPG 653
P I++ TPG
Sbjct: 142 EN-PDILLATPG 152
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +3
Query: 261 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 440
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 441 LQQLAPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 617
LQ+L + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 618 TACPHIVVGTPG 653
P I++ TPG
Sbjct: 142 EN-PDILLATPG 152
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Frame = +3
Query: 231 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 410
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 128 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 187
Query: 411 GKTAVFVLATLQQLA---------PSESH---VY---VLVMCHTRELAFQISKEYERFSK 545
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 188 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 246
Query: 546 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
Y S ++ ++ +GG +D+ A HI++ TPG
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 282
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Frame = +3
Query: 231 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 410
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 112 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 171
Query: 411 GKTAVFVLATLQQLA---------PSESH---VY---VLVMCHTRELAFQISKEYERFSK 545
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 172 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 230
Query: 546 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
Y S ++ ++ +GG +D+ A HI++ TPG
Sbjct: 231 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 266
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Frame = +3
Query: 231 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 410
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 109 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 168
Query: 411 GKTAVFVLATLQQLA---------PSESH---VY---VLVMCHTRELAFQISKEYERFSK 545
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 169 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 227
Query: 546 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
Y S ++ ++ +GG +D+ A HI++ TPG
Sbjct: 228 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 263
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 66.1 bits (154), Expect = 2e-11
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Frame = +3
Query: 222 PKKEVKGSYVSIHSSGFRDFLLKP-EILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQ 395
PKK K + S ++ F P E+L AI GF P+E+Q +P AV D+L
Sbjct: 140 PKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGA 199
Query: 396 AKSGMGKTAVFVLATLQQLAPSESHVY-----------VLVMCHTRELAFQISKEYERFS 542
A++G GKT F + + +L S L++ TREL QI K
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 543 KYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+ S+ GG+ K E ++ P IVV TPG
Sbjct: 260 STTQLIATSI-VGGLAQVKQERIISQQRPDIVVATPG 295
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 62.5 bits (145), Expect = 3e-10
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Frame = +3
Query: 234 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
+KG V + + E+ +A+ + G+ P+ +Q + IP + D++ A++G G
Sbjct: 291 IKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSG 350
Query: 414 KTAVFVLATLQQLAP-----SESH----VYVLVMCHTRELAFQISKEYERFSKYMSGVRV 566
KTA F+L L + + H Y ++M TRELA QI +E +F K + V
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTV 410
Query: 567 SVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
SV G ++D+ + +V+ TPG
Sbjct: 411 SVIGGAS--REDQGMKLRMGVEVVIATPG 437
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 443
F F ++ AI +E P+ +Q IP A+ G D+L AK+G GKTA ++ +
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 444 ----QQLAPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 611
L E V V+V+ TRELA Q+ +E ++F K + + + GG ++ E
Sbjct: 327 IMDQPDLKAGEGPVAVIVV-PTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNE- 384
Query: 612 LKTACPHIVVGTPG 653
L+ +VV TPG
Sbjct: 385 LQNEGAEMVVCTPG 398
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 60.1 bits (139), Expect = 1e-09
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +3
Query: 324 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ------QLAPSESHVYVLV 485
+ P+ +Q + IP + G D++ AK+G GKT F+L + +L + + V +
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAV-I 382
Query: 486 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+ TRELA Q KE +F+K + G++V+ +GG+ I + LK IVV TPG
Sbjct: 383 LAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGA-EIVVCTPG 436
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/122 (26%), Positives = 61/122 (50%)
Frame = +3
Query: 285 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSE 464
LK E+LR I GFE PS +Q + G D+ Q+++G GKT + ++ LQ + +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 465 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 644
+H+ V+++ R +A + +E+ + V+ G + + + H+++G
Sbjct: 63 AHLQVILLAPQRGMA---QRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS----HVLMG 115
Query: 645 TP 650
TP
Sbjct: 116 TP 117
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 58.0 bits (134), Expect = 5e-09
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Frame = +3
Query: 237 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 414 KTAVFVLATLQQL---------APSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV 566
KTA F+L + +L A + +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 567 SVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+GG+ + ++ + C I+VGT G
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIG 434
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 58.0 bits (134), Expect = 5e-09
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Frame = +3
Query: 237 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 413
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 414 KTAVFVLATLQQL---------APSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV 566
KTA F+L + +L A + +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 567 SVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+GG+ + ++ + C I+VGT G
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIG 434
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.6 bits (123), Expect = 1e-07
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Frame = +3
Query: 321 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL----QQLAPSESH------ 470
GFE PS +Q + P + G D + +++G GKT F+L L QLA E +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 471 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 647
+VLV+ TRELA QI E +++S +G + +GG + E + IV+ T
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV-EIVIAT 219
Query: 648 PG 653
PG
Sbjct: 220 PG 221
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 51.2 bits (117), Expect = 6e-07
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F DF L IL++I + G+E ++VQ I A+ +I+ +A++G GKT F++ +Q+
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 450 L-APSESH-----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE-E 608
L A S+++ +++ T+EL QI K + + S+ + ++ I ++E
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQA---INLCDINEEENS 207
Query: 609 VLKTACPHIVVGTPG 653
V H+VV TPG
Sbjct: 208 VWLEDRSHVVVTTPG 222
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F DF L L + D + P+E+Q + I ++ G D++ AK+G GKT V+ L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 450 LAPSE-SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 617
L ++ S Y L++ TRELA Q + G + GG + + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH-HGFSCGLVIGGSDVAFERN--R 194
Query: 618 TACPHIVVGTPG 653
+ +I+V TPG
Sbjct: 195 ISGINIIVCTPG 206
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 462 KGQIEKGAT-IIVGTVG 477
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 462 KGQIEKGAT-IIVGTVG 477
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 462 KGQIEKGAT-IIVGTVG 477
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Frame = +3
Query: 324 FEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVFVLATLQQLAPSESHVY-------- 476
F P+E+Q +P AV D+L A++G GKT F + + +L S
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 477 ---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 647
L++ TREL QI K + S+ GG+ K E ++ P IVV T
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVAT 126
Query: 648 PG 653
PG
Sbjct: 127 PG 128
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 49.6 bits (113), Expect = 2e-06
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Frame = +3
Query: 324 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSESH------VYVLV 485
F+ P+ +Q P A+ G DI+ AK+G GKT F+L L + ++H VLV
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHIT-KQAHRQRGEGPAVLV 207
Query: 486 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+ TRELA Q+ + F + G++++ FGG L+ IVV TPG
Sbjct: 208 LLPTRELAQQVQEVSIDFC-HSLGLKMTCLFGGASKGPQARDLERGV-DIVVATPG 261
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.4 bits (110), Expect = 4e-06
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Frame = +3
Query: 297 ILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLA----PSE 464
+L+A+ GF +E+Q + I + G D+L AK+G GKT F+L ++ L
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 465 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 638
+ V+++ TREL+ Q Y S+ + G ++ + GG +++ L I+
Sbjct: 139 NGTGVIIVSPTRELSMQ---TYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGV-SIL 194
Query: 639 VGTPG 653
V TPG
Sbjct: 195 VATPG 199
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = +3
Query: 285 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSE 464
L PE+L + D ++ ++VQ + D++ ++ +G GKT FVL ++ + ++
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 465 ---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 635
+ + L++ +REL QI + F++ ++ + V GG + K+ ++ K +I
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLN-LTVETVTGGQKVDKNIKMFKNKNVNI 134
Query: 636 VVGTPG 653
+V TPG
Sbjct: 135 LVATPG 140
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 673 KGQIEKGAT-IIVGTVG 688
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 673 KGQIEKGAT-IIVGTVG 688
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Frame = +3
Query: 270 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 449
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 450 L-------APSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 602
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 603 EEVLKTACPHIVVGTPG 653
+ ++ I+VGT G
Sbjct: 673 KGQIEKGAT-IIVGTVG 688
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Frame = +3
Query: 231 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 410
E++ + + + + + L P IL + + + +Q IPQ + G D+L QA++
Sbjct: 370 EIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSA 429
Query: 411 GKTAVFVLATLQQL----------APSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 560
GKTA F L + ++ A + L++ TRELA QI + + + + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQ-NTDI 488
Query: 561 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
V + +G + ++ C I++GT G
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGC-DILIGTCG 518
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Frame = +3
Query: 321 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLAPSESHV--------Y 476
G P+ +Q + IP A+ G D++ A +G GKT FVL + E + +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 477 VLVMCHTRELAFQ----ISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 641
L++ +RELA Q I + ++ K + +R + GG+PI + + ++ HIVV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI-HIVV 327
Query: 642 GTPG 653
TPG
Sbjct: 328 ATPG 331
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 552 SGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 653
+G V GG P+ D E L + P++VV PG
Sbjct: 585 TGPLVRFATGGQPVASDIEQLIRSIPNMVVNVPG 618
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,927,127
Number of Sequences: 27780
Number of extensions: 310487
Number of successful extensions: 900
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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