Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_O01
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0051 - 10655867-10657057 182 2e-46
05_01_0264 + 2030080-2031270 181 4e-46
01_03_0090 - 12347165-12348349 181 5e-46
03_06_0635 + 35210755-35210855,35210938-35211088,35211171-352113... 28 5.5
08_02_0216 + 14390739-14390847,14390983-14391017,14391112-143911... 28 7.2
04_03_0847 - 20254736-20254933,20256127-20256201,20257538-202577... 28 7.2
11_03_0032 - 9105130-9105286,9105321-9105384,9106355-9106487 27 9.6
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 9.6
>01_02_0051 - 10655867-10657057
Length = 396
Score = 182 bits (443), Expect = 2e-46
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 2/160 (1%)
Frame = +2
Query: 167 GFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQGLMFGYATDETEECMPLTVV 340
G D + C V++ ++QQSP+IA GVH + + EE+GAGDQG MFGYATDET E MPL+ V
Sbjct: 87 GLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHV 146
Query: 341 LAHKLNQKIAELRRNGEFWWARPDSKTQVTCXYVFAGGATXPXXVHTVXVSLQHSEKITL 520
LA KL ++ E+R+NG W RPD KTQVT Y GA P VHTV +S QH E +T
Sbjct: 147 LATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTN 206
Query: 521 XTLRDEIREKVIKEVIPAQYLDERTVIHINPCGLFIIGXP 640
+ +++E VIK VIP QYLDE+T+ H+NP G F+IG P
Sbjct: 207 DEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGP 246
>05_01_0264 + 2030080-2031270
Length = 396
Score = 181 bits (441), Expect = 4e-46
Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
Frame = +2
Query: 167 GFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQGLMFGYATDETEECMPLTVV 340
G D C V++ ++QQSP+IA GVH + + EE+GAGDQG MFGYATDET E MPL+ V
Sbjct: 87 GLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHV 146
Query: 341 LAHKLNQKIAELRRNGEFWWARPDSKTQVTCXYVFAGGATXPXXVHTVXVSLQHSEKITL 520
LA KL ++ E+R+NG W RPD KTQVT Y GA P VHTV +S QH E +T
Sbjct: 147 LATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTN 206
Query: 521 XTLRDEIREKVIKEVIPAQYLDERTVIHINPCGLFIIGXP 640
+ +++E VIK VIP QYLDE+T+ H+NP G F+IG P
Sbjct: 207 DEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGP 246
>01_03_0090 - 12347165-12348349
Length = 394
Score = 181 bits (440), Expect = 5e-46
Identities = 85/160 (53%), Positives = 110/160 (68%), Gaps = 2/160 (1%)
Frame = +2
Query: 167 GFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQGLMFGYATDETEECMPLTVV 340
G D C V++ ++QQSP+IA GVH + + EE+GAGDQG MFGYATDET E MPL+ V
Sbjct: 86 GLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHV 145
Query: 341 LAHKLNQKIAELRRNGEFWWARPDSKTQVTCXYVFAGGATXPXXVHTVXVSLQHSEKITL 520
LA KL ++ E+R+NG W RPD KTQVT Y+ GA P VHTV +S QH E +T
Sbjct: 146 LATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTN 205
Query: 521 XTLRDEIREKVIKEVIPAQYLDERTVIHINPCGLFIIGXP 640
+ +++E VIK VIP +YLDE+T+ H+NP G F+IG P
Sbjct: 206 DEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGP 245
>03_06_0635 +
35210755-35210855,35210938-35211088,35211171-35211341,
35211864-35212043,35213174-35213303,35213580-35213749
Length = 300
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +2
Query: 56 LIN*FMITASLG*GNKIRGVSH--NIFNYLVIKICMFGPGFDYKTCSVMLALDQQSPNIA 229
+IN ++ S+ + G I Y+ IK +F + +++ + +
Sbjct: 169 VINNLLLNVSMSNDRTLSGADDFLPILIYITIKESVFQTHMESARLGNHISVASTNSSQG 228
Query: 230 AGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 367
G +EE G +GL F + ETE P V H+L +++
Sbjct: 229 LGTSTPGQNEESG-DTEGLKFPFMDSETESLTPAEVKQLHELYRQV 273
>08_02_0216 +
14390739-14390847,14390983-14391017,14391112-14391153,
14391253-14391346,14391476-14391672,14392407-14392424,
14392938-14393182,14393300-14393657,14393741-14394316,
14395172-14395447
Length = 649
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 631 NYKESTWINVNYSSLIKILCRDNLFDDLF 545
N +E TW+N +YS ++K L ++ D F
Sbjct: 403 NIEEFTWLNASYSPVLKQLESQSMIDYYF 431
>04_03_0847 -
20254736-20254933,20256127-20256201,20257538-20257717,
20257802-20257869,20258563-20259125,20259198-20259235
Length = 373
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 376 ELCNFLIEFVCKHYSQRHAFFC 311
E+ +FL+ +H +QRHAF C
Sbjct: 87 EVIDFLLALPSRHPAQRHAFLC 108
>11_03_0032 - 9105130-9105286,9105321-9105384,9106355-9106487
Length = 117
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 131 NYLVIKICMFGPGFDYKTCSVMLALDQQSPNIAAGVHENRN 253
NY+V + + Y+ C++ + Q S N + HE+ N
Sbjct: 64 NYIVCHLLLNSQSRQYEECNLKTVVLQNSDNAGSSAHESGN 104
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 179 KTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLN 358
K SV++A+D Q P+ A+ + E+ G G Q EC+ + +VLA + N
Sbjct: 2288 KIASVVIAVDDQDPSNASDKDAPASTEDDGNGLQS-----------ECVHVDLVLAKQDN 2336
Query: 359 QKIAELRRNGE 391
K+ + +++ +
Sbjct: 2337 TKVEDTQKSNQ 2347
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,645
Number of Sequences: 37544
Number of extensions: 337436
Number of successful extensions: 839
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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