Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_N22
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 293 MSKWYPNRYRLLCRCPYLSPSCRR 222
           MS  Y N ++  CRC   +PS  R
Sbjct: 319 MSAKYRNAFKETCRCSPSNPSITR 342


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 259 SNRYRFGYHLLMCRCLQKWT 318
           SN++R  + L++  C  KW+
Sbjct: 352 SNKFREAFKLMLPNCCGKWS 371


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = -2

Query: 370  TYEGVMRFPLVIGNDFYTSIFVDTDT*VSGT---QIDTDYCADVLIFLLLVVGTN 215
            TYE V  FP   G  F  +  V   T  SGT   QI+ D+   V   L L    N
Sbjct: 921  TYESVHSFPTETGLPFVYTFNVIKLTKTSGTVQAQINPDFAFIVNSNLRLTFSKN 975


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 178 PHLDQAKSID*KTPEINKNLN 116
           PHL ++ +I    P + KNLN
Sbjct: 233 PHLFESANISLDEPPLGKNLN 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,830
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)