Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_N07
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   323   1e-88
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   323   1e-88
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   323   1e-88
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   323   1e-88
X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   322   3e-88
AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-P...    30   2.5  

>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  323 bits (794), Expect = 1e-88
 Identities = 154/164 (93%), Positives = 157/164 (95%)
 Frame = +3

Query: 177 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 357 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 536
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
           IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MA
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA 200


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  323 bits (794), Expect = 1e-88
 Identities = 154/164 (93%), Positives = 157/164 (95%)
 Frame = +3

Query: 177 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 357 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 536
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
           IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MA
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA 200


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  323 bits (794), Expect = 1e-88
 Identities = 154/164 (93%), Positives = 157/164 (95%)
 Frame = +3

Query: 177 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 357 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 536
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
           IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MA
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA 200


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  323 bits (794), Expect = 1e-88
 Identities = 154/164 (93%), Positives = 157/164 (95%)
 Frame = +3

Query: 177 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 357 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 536
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
           IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MA
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA 200


>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  322 bits (791), Expect = 3e-88
 Identities = 153/164 (93%), Positives = 157/164 (95%)
 Frame = +3

Query: 177 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 357 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 536
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
           IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MA
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMA 200


>AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-PA
            protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 546  PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 668
            PH+V  K  G  G + + L+P   G G+++  + K+L + A
Sbjct: 907  PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,800,852
Number of Sequences: 53049
Number of extensions: 637306
Number of successful extensions: 1664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)